Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   ETT59_RS05190 Genome accession   NZ_CP035440
Coordinates   1026207..1026395 (-) Length   62 a.a.
NCBI ID   WP_136105726.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm124     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1021207..1031395
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT59_RS05175 (ETT59_05175) - 1022847..1024094 (-) 1248 WP_023079234.1 tetratricopeptide repeat protein -
  ETT59_RS05180 (ETT59_05180) - 1024084..1025265 (-) 1182 WP_002990002.1 AI-2E family transporter -
  ETT59_RS05185 (ETT59_05185) mutX 1025323..1025799 (-) 477 WP_002984880.1 8-oxo-dGTP diphosphatase Machinery gene
  ETT59_RS05190 (ETT59_05190) prx 1026207..1026395 (-) 189 WP_136105726.1 Paratox Regulator
  ETT59_RS05195 (ETT59_05195) - 1027099..1027317 (-) 219 Protein_935 SH3 domain-containing protein -
  ETT59_RS05200 (ETT59_05200) - 1027406..1027645 (-) 240 WP_014411882.1 helix-turn-helix transcriptional regulator -
  ETT59_RS05205 (ETT59_05205) - 1027742..1028521 (+) 780 WP_085613681.1 hypothetical protein -
  ETT59_RS05210 (ETT59_05210) - 1028655..1028813 (-) 159 WP_085613682.1 hypothetical protein -
  ETT59_RS05215 (ETT59_05215) irvR 1029186..1029974 (+) 789 WP_111676459.1 S24 family peptidase Regulator
  ETT59_RS05220 (ETT59_05220) - 1029984..1030289 (+) 306 WP_011106738.1 membrane protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7238.14 Da        Isoelectric Point: 3.9282

>NTDB_id=302142 ETT59_RS05190 WP_136105726.1 1026207..1026395(-) (prx) [Streptococcus pyogenes strain emm124]
MLTYDEFKQAIDNGYITADAVMIVRKNGQIFDYVLPHEEIRDWEVVTIERISDVMAELSESE

Nucleotide


Download         Length: 189 bp        

>NTDB_id=302142 ETT59_RS05190 WP_136105726.1 1026207..1026395(-) (prx) [Streptococcus pyogenes strain emm124]
ATGCTAACATACGACGAATTTAAGCAAGCGATTGACAATGGATATATCACAGCAGACGCAGTAATGATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTGTTGCCGCATGAGGAGATAAGAGATTGGGAGGTTGTGACAATCGAGCGGATATCAGATG
TTATGGCAGAACTTTCTGAGTCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

75.862

93.548

0.71
  prx Streptococcus pyogenes MGAS315

74.576

95.161

0.71
  prx Streptococcus pyogenes MGAS315

70

96.774

0.677
  prx Streptococcus pyogenes MGAS8232

71.186

95.161

0.677
  prx Streptococcus pyogenes MGAS315

85.714

67.742

0.581
  prx Streptococcus pyogenes MGAS315

82.927

66.129

0.548
  prx Streptococcus pyogenes MGAS315

73.81

67.742

0.5

Multiple sequence alignment