Detailed information    

insolico Bioinformatically predicted

Overview

Name   irvR   Type   Regulator
Locus tag   ETT59_RS05215 Genome accession   NZ_CP035440
Coordinates   1029186..1029974 (+) Length   262 a.a.
NCBI ID   WP_111676459.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm124     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1024186..1034974
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT59_RS05185 (ETT59_05185) mutX 1025323..1025799 (-) 477 WP_002984880.1 8-oxo-dGTP diphosphatase Machinery gene
  ETT59_RS05190 (ETT59_05190) prx 1026207..1026395 (-) 189 WP_136105726.1 Paratox Regulator
  ETT59_RS05195 (ETT59_05195) - 1027099..1027317 (-) 219 Protein_935 SH3 domain-containing protein -
  ETT59_RS05200 (ETT59_05200) - 1027406..1027645 (-) 240 WP_014411882.1 helix-turn-helix transcriptional regulator -
  ETT59_RS05205 (ETT59_05205) - 1027742..1028521 (+) 780 WP_085613681.1 hypothetical protein -
  ETT59_RS05210 (ETT59_05210) - 1028655..1028813 (-) 159 WP_085613682.1 hypothetical protein -
  ETT59_RS05215 (ETT59_05215) irvR 1029186..1029974 (+) 789 WP_111676459.1 S24 family peptidase Regulator
  ETT59_RS05220 (ETT59_05220) - 1029984..1030289 (+) 306 WP_011106738.1 membrane protein -
  ETT59_RS05225 (ETT59_05225) - 1030413..1031552 (+) 1140 WP_002990094.1 site-specific integrase -
  ETT59_RS05230 (ETT59_05230) rfbB 1031646..1032686 (-) 1041 WP_010922196.1 dTDP-glucose 4,6-dehydratase -
  ETT59_RS05235 (ETT59_05235) - 1032930..1033523 (-) 594 WP_002990099.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  ETT59_RS05240 (ETT59_05240) rfbA 1033523..1034392 (-) 870 WP_002992970.1 glucose-1-phosphate thymidylyltransferase RfbA -

Sequence

Protein


Download         Length: 262 a.a.        Molecular weight: 30063.21 Da        Isoelectric Point: 8.1141

>NTDB_id=302143 ETT59_RS05215 WP_111676459.1 1029186..1029974(+) (irvR) [Streptococcus pyogenes strain emm124]
MARGRGKLTPQDEEYKKIISAKINNLLLENNLKQGHLADALEIPRSSFNEYVKGNSLPNPGNVQKIADYFGLMKSDIDPR
FAPRKKNHELKIPTSPLVKKITTTVVELNVPRKQKVLDFATEQLKEQKNKITSIEKKLYEYKVYEKLSAGTGYGYFGDGN
YDTVFYDEELDYDFASWVFGDSMEPTYLNGEVVLIKQTGFDYEGGIYAVEWDGQTYIKKVYREKDGLRLVSLNKKYNDKF
APFSEGPRIIGEIVGNFMPKEY

Nucleotide


Download         Length: 789 bp        

>NTDB_id=302143 ETT59_RS05215 WP_111676459.1 1029186..1029974(+) (irvR) [Streptococcus pyogenes strain emm124]
ATGGCAAGAGGACGAGGGAAATTAACACCTCAAGACGAGGAATACAAAAAGATAATTTCTGCTAAAATTAACAATTTATT
GCTAGAAAACAATTTAAAACAAGGACATTTAGCTGATGCATTGGAAATTCCACGAAGTAGTTTTAATGAATATGTCAAAG
GAAATTCCTTACCTAATCCTGGTAACGTTCAAAAGATAGCTGATTATTTCGGGTTAATGAAATCTGATATAGATCCTAGA
TTTGCACCTCGTAAGAAAAATCACGAACTCAAAATCCCTACTTCTCCACTTGTCAAAAAAATAACCACAACAGTCGTAGA
ATTAAATGTTCCTCGTAAGCAAAAAGTTTTAGACTTTGCAACAGAACAATTGAAAGAGCAAAAAAATAAAATTACTTCAA
TAGAGAAAAAACTATATGAATACAAAGTCTATGAGAAACTTTCCGCAGGTACAGGTTATGGATATTTTGGTGATGGGAAC
TATGATACTGTTTTTTACGACGAAGAATTAGATTACGATTTTGCCTCTTGGGTTTTTGGTGATTCTATGGAACCAACTTA
TCTGAATGGTGAGGTTGTGCTTATAAAACAAACTGGCTTTGATTATGAAGGTGGCATCTATGCCGTAGAGTGGGACGGAC
AAACCTATATTAAGAAAGTTTACAGAGAAAAGGATGGCTTGCGCCTTGTGTCTTTAAATAAAAAATACAATGACAAGTTT
GCTCCTTTTAGTGAAGGCCCTCGTATAATAGGGGAAATTGTCGGTAACTTTATGCCTAAAGAGTACTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(168-254)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  irvR Streptococcus mutans UA159

38.158

100

0.443

Multiple sequence alignment