Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   ETT60_RS04285 Genome accession   NZ_CP035439
Coordinates   803130..803318 (+) Length   62 a.a.
NCBI ID   WP_136022789.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm77     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 798130..808318
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT60_RS04250 (ETT60_04240) - 799292..799453 (+) 162 WP_002988795.1 hypothetical protein -
  ETT60_RS04255 (ETT60_04245) - 799456..800067 (+) 612 WP_136022792.1 hypothetical protein -
  ETT60_RS04260 (ETT60_04250) - 800077..800373 (+) 297 WP_002990012.1 hypothetical protein -
  ETT60_RS04265 (ETT60_04255) - 800370..800555 (+) 186 WP_002990010.1 holin -
  ETT60_RS04270 (ETT60_04260) - 800667..802001 (+) 1335 WP_011284838.1 GH25 family lysozyme -
  ETT60_RS04275 (ETT60_04265) - 802250..802525 (+) 276 WP_136022791.1 hypothetical protein -
  ETT60_RS04280 (ETT60_04270) - 802527..803012 (+) 486 WP_136022790.1 hypothetical protein -
  ETT60_RS04285 (ETT60_04275) prx 803130..803318 (+) 189 WP_136022789.1 Paratox Regulator
  ETT60_RS04290 (ETT60_04280) mutX 803726..804202 (+) 477 WP_002984880.1 8-oxo-dGTP diphosphatase Machinery gene
  ETT60_RS04295 (ETT60_04285) - 804260..805441 (+) 1182 WP_002990002.1 AI-2E family transporter -
  ETT60_RS04300 (ETT60_04290) - 805431..806678 (+) 1248 WP_129284060.1 lipopolysaccharide assembly protein LapB -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7268.17 Da        Isoelectric Point: 3.9282

>NTDB_id=302028 ETT60_RS04285 WP_136022789.1 803130..803318(+) (prx) [Streptococcus pyogenes strain emm77]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLPHEEIRDWEVVTIERISDVMAELSESE

Nucleotide


Download         Length: 189 bp        

>NTDB_id=302028 ETT60_RS04285 WP_136022789.1 803130..803318(+) (prx) [Streptococcus pyogenes strain emm77]
ATGCTAACATACGACGAATTTAAGCAAGCGATTGACAATGGATATATCACAGCAGACACAGTTATGATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTGTTGCCGCATGAGGAGATAAGAGATTGGGAGGTTGTGACAATCGAGCGGATATCAGATG
TTATGGCAGAACTTTCTGAGTCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

76.271

95.161

0.726
  prx Streptococcus pyogenes MGAS315

77.586

93.548

0.726
  prx Streptococcus pyogenes MGAS315

71.667

96.774

0.694
  prx Streptococcus pyogenes MGAS8232

72.881

95.161

0.694
  prx Streptococcus pyogenes MGAS315

88.095

67.742

0.597
  prx Streptococcus pyogenes MGAS315

85.366

66.129

0.565
  prx Streptococcus pyogenes MGAS315

76.19

67.742

0.516

Multiple sequence alignment