Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   ETT70_RS04140 Genome accession   NZ_CP035429
Coordinates   773263..773451 (+) Length   62 a.a.
NCBI ID   WP_136105726.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emmNA     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 768263..778451
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT70_RS04115 (ETT70_04105) - 769691..770119 (+) 429 WP_063629045.1 DUF1617 family protein -
  ETT70_RS04120 (ETT70_04110) - 770122..770754 (+) 633 WP_063629046.1 hypothetical protein -
  ETT70_RS04125 (ETT70_04115) - 770765..771064 (+) 300 WP_002993162.1 hypothetical protein -
  ETT70_RS04130 (ETT70_04120) - 771061..771246 (+) 186 WP_111676573.1 holin -
  ETT70_RS04135 (ETT70_04125) - 771357..772559 (+) 1203 WP_136275815.1 glucosaminidase domain-containing protein -
  ETT70_RS04140 (ETT70_04130) prx 773263..773451 (+) 189 WP_136105726.1 Paratox Regulator
  ETT70_RS04145 (ETT70_04135) mutX 773859..774335 (+) 477 WP_002984880.1 8-oxo-dGTP diphosphatase Machinery gene
  ETT70_RS04150 (ETT70_04140) - 774393..775574 (+) 1182 WP_011284730.1 AI-2E family transporter -
  ETT70_RS04155 (ETT70_04145) - 775564..776811 (+) 1248 WP_136275816.1 tetratricopeptide repeat protein -

Sequence


Protein


Download         Length: 62 a.a.        Molecular weight: 7238.14 Da        Isoelectric Point: 3.9282

>NTDB_id=301088 ETT70_RS04140 WP_136105726.1 773263..773451(+) (prx) [Streptococcus pyogenes strain emmNA]
MLTYDEFKQAIDNGYITADAVMIVRKNGQIFDYVLPHEEIRDWEVVTIERISDVMAELSESE

Nucleotide


Download         Length: 189 bp        

>NTDB_id=301088 ETT70_RS04140 WP_136105726.1 773263..773451(+) (prx) [Streptococcus pyogenes strain emmNA]
ATGCTAACATACGACGAATTTAAGCAAGCGATTGACAATGGATATATCACAGCAGACGCAGTAATGATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTGTTGCCGCATGAGGAGATAAGAGATTGGGAGGTTGTGACAATCGAGCGGATATCAGATG
TTATGGCAGAACTTTCTGAGTCTGAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

75.862

93.548

0.71

  prx Streptococcus pyogenes MGAS315

74.576

95.161

0.71

  prx Streptococcus pyogenes MGAS315

70

96.774

0.677

  prx Streptococcus pyogenes MGAS8232

71.186

95.161

0.677

  prx Streptococcus pyogenes MGAS315

85.714

67.742

0.581

  prx Streptococcus pyogenes MGAS315

82.927

66.129

0.548

  prx Streptococcus pyogenes MGAS315

73.81

67.742

0.5


Multiple sequence alignment