Detailed information NTG0298591

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: DOM24_RS13245
• Genome accession: NZ_CP030031
• Coordinates: 2806093..2807151 (-)
• Length: 352 a.a.
• NCBI ID: WP_005024205.1
• Uniprot ID: A0A2T1J1Z2
• Organism: Acinetobacter radioresistens strain LH6
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2801093..2812151

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DOM24_RS14840 (DOM24_13220)	aroK	2801417..2801968 (-)	552	WP_005018052.1	shikimate kinase AroK	-
DOM24_RS13225 (DOM24_13225)	pilQ	2802005..2804185 (-)	2181	WP_111282511.1	type IV pilus secretin PilQ	Machinery gene
DOM24_RS13230 (DOM24_13230)	pilP	2804203..2804730 (-)	528	WP_005018049.1	pilus assembly protein PilP	Machinery gene
DOM24_RS13235 (DOM24_13235)	comO	2804727..2805437 (-)	711	WP_111282513.1	type 4a pilus biogenesis protein PilO	Machinery gene
DOM24_RS13240 (DOM24_13240)	pilN	2805434..2806093 (-)	660	WP_111282515.1	PilN domain-containing protein	Machinery gene
DOM24_RS13245 (DOM24_13245)	comM	2806093..2807151 (-)	1059	WP_005024205.1	pilus assembly protein PilM	Machinery gene
DOM24_RS13250 (DOM24_13250)	ponA	2807313..2809859 (+)	2547	WP_111282517.1	penicillin-binding protein PBP1a	-
DOM24_RS13255 (DOM24_13255)	-	2809906..2810712 (-)	807	WP_005018037.1	putative RNA methyltransferase	-
DOM24_RS13260 (DOM24_13260)	mraY	2810779..2811897 (-)	1119	WP_005018035.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38898.47 Da
• Isoelectric Point: 4.4198

>NTDB_id=298591 DOM24_RS13245 WP_005024205.1 2806093..2807151(-) (comM) [Acinetobacter radioresistens strain LH6]
MLRLYRKPNKGLVGIDVSSTSVKLLELSVKGGRYWVESYGLYPLSDGSVVEKNILNPEAVADALERVIDIANPQAANAAF
AVPTSAVINKVIEMDADMNDDEREVQIRMDAEQYIPFPLDEVSLDFEVLPDILANPDRVNVLLVATRTENVDARVEVLEM
AGLTAKIADVESYALERAFKVFADTLPIGVNTVGILDIGHTMTTLSVMQHGKIIYTREQVFGGKQLTQDIQNRYGLSYEE
AGRAKKERNLPDDYDIEILEPFLEALVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFAPQVDVQKVEKDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=298591 DOM24_RS13245 WP_005024205.1 2806093..2807151(-) (comM) [Acinetobacter radioresistens strain LH6]
GTGCTCAGGTTATATCGTAAACCAAATAAAGGATTAGTCGGAATAGATGTAAGTTCTACTTCGGTTAAATTGTTAGAGCT
CTCTGTAAAAGGTGGCAGATACTGGGTTGAAAGTTACGGGCTTTATCCGCTTTCCGATGGAAGTGTCGTTGAAAAAAATA
TTCTGAATCCTGAAGCGGTTGCCGATGCTTTAGAGCGCGTAATTGACATTGCTAACCCTCAGGCGGCTAATGCGGCTTTT
GCAGTACCTACTTCGGCGGTGATTAATAAAGTCATCGAGATGGATGCAGACATGAACGATGATGAACGCGAAGTTCAGAT
CCGTATGGATGCAGAGCAATATATTCCTTTTCCTTTAGACGAAGTCAGTCTTGATTTCGAAGTGTTGCCAGATATATTGG
CAAATCCTGATCGAGTAAATGTACTGCTAGTGGCAACCCGTACTGAAAATGTAGATGCACGTGTCGAAGTGCTGGAAATG
GCAGGTCTAACCGCGAAAATTGCTGATGTAGAAAGTTATGCGCTAGAACGTGCGTTTAAAGTGTTCGCTGATACATTGCC
TATAGGGGTGAATACTGTAGGTATTCTAGATATCGGCCACACCATGACAACTTTGTCTGTCATGCAGCATGGCAAGATTA
TCTATACTCGCGAGCAGGTTTTTGGTGGAAAGCAGCTGACTCAGGACATCCAGAATCGTTATGGCCTTTCCTATGAAGAA
GCTGGCCGGGCCAAAAAAGAGCGTAATTTGCCAGATGATTATGATATTGAAATACTCGAGCCTTTCTTAGAGGCCTTAGT
GCAACAGGCTGCTCGTTCTTTGCAGTTTTTTTTCTCGTCTTCACAGTTTAATGAGATTGATCATATTTTATTGGCAGGTG
GAAATGCCAACATACCGGGACTGGCCAAATTACTCCAACAAAAGCTGGGCTACCGGGTAACAATTGCCAATCCATTTTTA
CAGATGGGTTTTGCGCCGCAGGTTGATGTACAAAAAGTTGAAAAAGATGCATCTTCACTCATGGTGGCTTGTGGTTTGGC
GCTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: A0A2T1J1Z2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	84.375	100	0.844
pilM	Acinetobacter baumannii D1279779	84.375	100	0.844
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	41.808	100	0.42