Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | DOM24_RS13230 | Genome accession | NZ_CP030031 |
| Coordinates | 2804203..2804730 (-) | Length | 175 a.a. |
| NCBI ID | WP_005018049.1 | Uniprot ID | A0A062BZX0 |
| Organism | Acinetobacter radioresistens strain LH6 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2799203..2809730
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DOM24_RS13210 (DOM24_13210) | - | 2799442..2800305 (-) | 864 | WP_111282507.1 | hypothetical protein | - |
| DOM24_RS13215 (DOM24_13215) | aroB | 2800313..2801398 (-) | 1086 | WP_111282509.1 | 3-dehydroquinate synthase | - |
| DOM24_RS14840 (DOM24_13220) | aroK | 2801417..2801968 (-) | 552 | WP_005018052.1 | shikimate kinase AroK | - |
| DOM24_RS13225 (DOM24_13225) | pilQ | 2802005..2804185 (-) | 2181 | WP_111282511.1 | type IV pilus secretin PilQ | Machinery gene |
| DOM24_RS13230 (DOM24_13230) | pilP | 2804203..2804730 (-) | 528 | WP_005018049.1 | pilus assembly protein PilP | Machinery gene |
| DOM24_RS13235 (DOM24_13235) | comO | 2804727..2805437 (-) | 711 | WP_111282513.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| DOM24_RS13240 (DOM24_13240) | pilN | 2805434..2806093 (-) | 660 | WP_111282515.1 | PilN domain-containing protein | Machinery gene |
| DOM24_RS13245 (DOM24_13245) | comM | 2806093..2807151 (-) | 1059 | WP_005024205.1 | pilus assembly protein PilM | Machinery gene |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19435.61 Da Isoelectric Point: 7.7737
>NTDB_id=298588 DOM24_RS13230 WP_005018049.1 2804203..2804730(-) (pilP) [Acinetobacter radioresistens strain LH6]
MTWNKIILGLCCGMILVGCDSRIDAVNEEMAVIRNQPPLPIEPAPVFSPVPTFAYAAHQFRSPFLPSSLAAELKVMAGKR
VYPNFSRQPQPLESYALESLNMKGSMRNSRGQIIALIQTPDGQIEQVQRGNYMGMHHGRIVQITPTQIDLVEIIPDGREG
YVERPRSLVLIGPQP
MTWNKIILGLCCGMILVGCDSRIDAVNEEMAVIRNQPPLPIEPAPVFSPVPTFAYAAHQFRSPFLPSSLAAELKVMAGKR
VYPNFSRQPQPLESYALESLNMKGSMRNSRGQIIALIQTPDGQIEQVQRGNYMGMHHGRIVQITPTQIDLVEIIPDGREG
YVERPRSLVLIGPQP
Nucleotide
Download Length: 528 bp
>NTDB_id=298588 DOM24_RS13230 WP_005018049.1 2804203..2804730(-) (pilP) [Acinetobacter radioresistens strain LH6]
ATGACTTGGAATAAGATCATTTTAGGCCTGTGCTGCGGCATGATTCTGGTAGGCTGTGATTCACGTATAGATGCAGTAAA
TGAAGAGATGGCAGTCATTCGTAACCAGCCACCTCTACCGATTGAACCGGCACCTGTGTTCAGTCCTGTACCTACATTTG
CTTATGCAGCACATCAGTTCAGAAGTCCATTTTTACCTAGCTCGCTTGCAGCTGAGTTAAAAGTTATGGCCGGGAAGCGG
GTTTATCCGAATTTTTCACGCCAACCCCAACCTCTTGAGAGCTATGCCCTTGAATCTTTAAATATGAAAGGCAGTATGCG
TAATTCAAGAGGGCAGATTATTGCACTAATCCAGACGCCCGATGGCCAGATTGAACAAGTGCAGCGCGGGAATTATATGG
GTATGCATCATGGGCGTATTGTTCAGATTACACCTACCCAGATTGACCTGGTTGAGATCATCCCGGATGGGCGAGAAGGC
TATGTGGAACGTCCCCGCAGTCTAGTACTGATTGGGCCACAGCCTTAA
ATGACTTGGAATAAGATCATTTTAGGCCTGTGCTGCGGCATGATTCTGGTAGGCTGTGATTCACGTATAGATGCAGTAAA
TGAAGAGATGGCAGTCATTCGTAACCAGCCACCTCTACCGATTGAACCGGCACCTGTGTTCAGTCCTGTACCTACATTTG
CTTATGCAGCACATCAGTTCAGAAGTCCATTTTTACCTAGCTCGCTTGCAGCTGAGTTAAAAGTTATGGCCGGGAAGCGG
GTTTATCCGAATTTTTCACGCCAACCCCAACCTCTTGAGAGCTATGCCCTTGAATCTTTAAATATGAAAGGCAGTATGCG
TAATTCAAGAGGGCAGATTATTGCACTAATCCAGACGCCCGATGGCCAGATTGAACAAGTGCAGCGCGGGAATTATATGG
GTATGCATCATGGGCGTATTGTTCAGATTACACCTACCCAGATTGACCTGGTTGAGATCATCCCGGATGGGCGAGAAGGC
TATGTGGAACGTCCCCGCAGTCTAGTACTGATTGGGCCACAGCCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
78.857 |
100 |
0.789 |
| comL | Acinetobacter baylyi ADP1 |
72.832 |
98.857 |
0.72 |