Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | CSB81_RS03885 | Genome accession | NZ_CP029667 |
| Coordinates | 696030..696500 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934753.1 | Uniprot ID | A0A1S5YP95 |
| Organism | Staphylococcus aureus strain AR_0225 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 670251..726200 | 696030..696500 | within | 0 |
Gene organization within MGE regions
Location: 670251..726200
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSB81_RS03710 (CSB81_0640) | groES | 670251..670535 (+) | 285 | WP_000917289.1 | co-chaperone GroES | - |
| CSB81_RS03715 (CSB81_0641) | groL | 670611..672227 (+) | 1617 | WP_000240645.1 | chaperonin GroEL | - |
| CSB81_RS03720 | - | 672322..672868 (-) | 547 | Protein_660 | site-specific integrase | - |
| CSB81_RS03725 | - | 672929..673141 (+) | 213 | WP_000128898.1 | hypothetical protein | - |
| CSB81_RS03730 (CSB81_0642) | - | 673138..673728 (+) | 591 | WP_001293058.1 | terminase small subunit | - |
| CSB81_RS03735 (CSB81_0643) | - | 674046..674482 (+) | 437 | Protein_663 | hypothetical protein | - |
| CSB81_RS03740 (CSB81_0644) | - | 674588..675031 (+) | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| CSB81_RS03750 (CSB81_0645) | - | 675884..677191 (-) | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| CSB81_RS03755 (CSB81_0646) | - | 677352..678263 (+) | 912 | WP_000825510.1 | iron-hydroxamate ABC transporter substrate-binding protein | - |
| CSB81_RS03760 (CSB81_0647) | - | 678325..679170 (+) | 846 | WP_000812010.1 | class I SAM-dependent methyltransferase | - |
| CSB81_RS03765 (CSB81_0648) | - | 679542..680765 (-) | 1224 | WP_000206639.1 | ArgE/DapE family deacylase | - |
| CSB81_RS03770 (CSB81_0649) | lukH | 681200..682255 (+) | 1056 | WP_000791407.1 | bi-component leukocidin LukGH subunit H | - |
| CSB81_RS03775 (CSB81_0650) | lukG | 682277..683293 (+) | 1017 | WP_000595324.1 | bi-component leukocidin LukGH subunit G | - |
| CSB81_RS03780 (CSB81_0651) | sph | 683531..684361 (-) | 831 | Protein_671 | sphingomyelin phosphodiesterase | - |
| CSB81_RS03785 (CSB81_0652) | - | 684412..685449 (-) | 1038 | WP_000857199.1 | site-specific integrase | - |
| CSB81_RS03790 (CSB81_0653) | - | 685640..686353 (-) | 714 | WP_001549185.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| CSB81_RS03795 (CSB81_0654) | - | 686431..686613 (-) | 183 | WP_000705246.1 | hypothetical protein | - |
| CSB81_RS03800 | - | 686817..687158 (-) | 342 | WP_000591749.1 | hypothetical protein | - |
| CSB81_RS03805 (CSB81_0655) | - | 687164..688096 (-) | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| CSB81_RS03810 (CSB81_0656) | - | 688112..688825 (-) | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| CSB81_RS03815 | - | 688788..688962 (+) | 175 | Protein_678 | transcriptional regulator | - |
| CSB81_RS03820 (CSB81_0657) | - | 688959..689222 (+) | 264 | WP_000854072.1 | helix-turn-helix transcriptional regulator | - |
| CSB81_RS03825 | - | 689238..689453 (+) | 216 | WP_001025404.1 | MW1434 family type I TA system toxin | - |
| CSB81_RS03830 (CSB81_0658) | - | 689442..689771 (-) | 330 | WP_000180411.1 | hypothetical protein | - |
| CSB81_RS03835 (CSB81_0659) | - | 689822..690574 (+) | 753 | WP_001148642.1 | phage antirepressor KilAC domain-containing protein | - |
| CSB81_RS15540 (CSB81_0660) | - | 690590..690766 (+) | 177 | WP_001001356.1 | hypothetical protein | - |
| CSB81_RS03840 (CSB81_0661) | - | 690763..690993 (-) | 231 | WP_000549548.1 | hypothetical protein | - |
| CSB81_RS03845 (CSB81_0662) | - | 691052..691372 (+) | 321 | WP_001120199.1 | DUF771 domain-containing protein | - |
| CSB81_RS03850 (CSB81_0663) | - | 691369..691530 (+) | 162 | WP_001285960.1 | DUF1270 domain-containing protein | - |
| CSB81_RS03855 (CSB81_0664) | - | 691625..691944 (+) | 320 | Protein_687 | DUF2482 family protein | - |
| CSB81_RS03860 (CSB81_0665) | - | 691925..692185 (+) | 261 | WP_000291513.1 | DUF1108 family protein | - |
| CSB81_RS03865 | - | 692194..692457 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| CSB81_RS03870 (CSB81_0666) | - | 692466..694409 (+) | 1944 | WP_000700561.1 | AAA family ATPase | - |
| CSB81_RS03875 (CSB81_0667) | - | 694411..695331 (+) | 921 | WP_000138475.1 | recombinase RecT | - |
| CSB81_RS03880 (CSB81_0668) | - | 695412..696029 (+) | 618 | WP_071665632.1 | MBL fold metallo-hydrolase | - |
| CSB81_RS03885 (CSB81_0669) | ssbA | 696030..696500 (+) | 471 | WP_000934753.1 | single-stranded DNA-binding protein | Machinery gene |
| CSB81_RS03890 (CSB81_0670) | - | 696530..697423 (+) | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| CSB81_RS03895 (CSB81_0671) | - | 697430..697648 (+) | 219 | WP_000338530.1 | hypothetical protein | - |
| CSB81_RS03900 (CSB81_0672) | - | 697657..698061 (+) | 405 | WP_000401977.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CSB81_RS03905 (CSB81_0673) | - | 698074..698442 (+) | 369 | WP_000101288.1 | SA1788 family PVL leukocidin-associated protein | - |
| CSB81_RS03910 (CSB81_0674) | - | 698446..698688 (+) | 243 | WP_000131383.1 | phi PVL orf 51-like protein | - |
| CSB81_RS03915 (CSB81_0675) | - | 698697..699068 (+) | 372 | WP_001549172.1 | hypothetical protein | - |
| CSB81_RS03920 (CSB81_0676) | - | 699061..699297 (+) | 237 | WP_001065101.1 | DUF1024 family protein | - |
| CSB81_RS03925 (CSB81_0677) | - | 699287..699529 (+) | 243 | WP_000700108.1 | hypothetical protein | - |
| CSB81_RS03930 (CSB81_0678) | - | 699522..700055 (+) | 534 | WP_000181819.1 | dUTP pyrophosphatase | - |
| CSB81_RS03935 | - | 700092..700337 (+) | 246 | WP_001282074.1 | hypothetical protein | - |
| CSB81_RS03940 (CSB81_0680) | - | 700334..700540 (+) | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| CSB81_RS03945 (CSB81_0681) | - | 700537..700923 (+) | 387 | WP_000592207.1 | hypothetical protein | - |
| CSB81_RS03950 (CSB81_0682) | - | 700920..701069 (+) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| CSB81_RS03955 (CSB81_0683) | - | 701069..701269 (+) | 201 | WP_000265043.1 | DUF1514 family protein | - |
| CSB81_RS03960 (CSB81_0684) | - | 701297..701713 (+) | 417 | WP_000590122.1 | hypothetical protein | - |
| CSB81_RS03965 (CSB81_0685) | - | 701945..702244 (+) | 300 | WP_000988336.1 | HNH endonuclease | - |
| CSB81_RS03970 (CSB81_0686) | - | 702374..702718 (+) | 345 | WP_000402904.1 | hypothetical protein | - |
| CSB81_RS03975 (CSB81_0687) | - | 702715..704376 (+) | 1662 | WP_110230798.1 | terminase large subunit | - |
| CSB81_RS03980 (CSB81_0688) | - | 704392..705579 (+) | 1188 | WP_000025274.1 | phage portal protein | - |
| CSB81_RS03985 (CSB81_0689) | - | 705563..706300 (+) | 738 | WP_000642728.1 | head maturation protease, ClpP-related | - |
| CSB81_RS03990 (CSB81_0690) | - | 706324..707469 (+) | 1146 | WP_000154559.1 | phage major capsid protein | - |
| CSB81_RS03995 (CSB81_0691) | - | 707489..707773 (+) | 285 | WP_000238236.1 | hypothetical protein | - |
| CSB81_RS04000 (CSB81_0692) | - | 707763..708047 (+) | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| CSB81_RS04005 (CSB81_0693) | - | 708031..708393 (+) | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| CSB81_RS04010 (CSB81_0694) | - | 708390..708794 (+) | 405 | WP_000114229.1 | HK97 gp10 family phage protein | - |
| CSB81_RS04015 | - | 708791..709195 (+) | 405 | WP_000565500.1 | hypothetical protein | - |
| CSB81_RS04020 (CSB81_0695) | - | 709199..709843 (+) | 645 | WP_000260578.1 | major tail protein | - |
| CSB81_RS04025 | - | 709885..710109 (+) | 225 | WP_076035566.1 | Ig-like domain-containing protein | - |
| CSB81_RS04030 (CSB81_0697) | - | 710159..710509 (+) | 351 | WP_001096354.1 | hypothetical protein | - |
| CSB81_RS15545 (CSB81_0698) | - | 710560..710697 (+) | 138 | WP_001549167.1 | hypothetical protein | - |
| CSB81_RS04035 (CSB81_0699) | - | 710754..715283 (+) | 4530 | WP_001549166.1 | phage tail tape measure protein | - |
| CSB81_RS04040 (CSB81_0700) | - | 715280..716764 (+) | 1485 | WP_000567394.1 | phage tail domain-containing protein | - |
| CSB81_RS04045 (CSB81_0701) | - | 716780..720565 (+) | 3786 | WP_110230799.1 | phage tail spike protein | - |
| CSB81_RS04050 (CSB81_0702) | - | 720555..720707 (+) | 153 | WP_001153681.1 | hypothetical protein | - |
| CSB81_RS04055 (CSB81_0703) | - | 720754..721041 (+) | 288 | WP_001040261.1 | hypothetical protein | - |
| CSB81_RS04060 (CSB81_0704) | - | 721099..721395 (+) | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| CSB81_RS04065 (CSB81_0705) | pepG1 | 721587..721721 (+) | 135 | WP_000226108.1 | type I toxin-antitoxin system toxin PepG1 | - |
| CSB81_RS04070 | - | 721774..721881 (-) | 108 | WP_001791821.1 | hypothetical protein | - |
| CSB81_RS04075 (CSB81_0706) | - | 721933..722187 (+) | 255 | WP_000611512.1 | phage holin | - |
| CSB81_RS04080 (CSB81_0707) | - | 722199..722954 (+) | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| CSB81_RS04085 (CSB81_0708) | sak | 723145..723636 (+) | 492 | WP_000919350.1 | staphylokinase | - |
| CSB81_RS04095 (CSB81_0709) | - | 724286..724621 (+) | 336 | Protein_735 | SH3 domain-containing protein | - |
| CSB81_RS04100 (CSB81_0710) | - | 724716..725165 (-) | 450 | WP_000727649.1 | chemotaxis-inhibiting protein CHIPS | - |
| CSB81_RS04105 (CSB81_0711) | scn | 725850..726200 (+) | 351 | WP_000702263.1 | complement inhibitor SCIN-A | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17668.55 Da Isoelectric Point: 5.2672
>NTDB_id=294869 CSB81_RS03885 WP_000934753.1 696030..696500(+) (ssbA) [Staphylococcus aureus strain AR_0225]
MLNRTILVGRLTRDPELRTTQNGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
MLNRTILVGRLTRDPELRTTQNGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=294869 CSB81_RS03885 WP_000934753.1 696030..696500(+) (ssbA) [Staphylococcus aureus strain AR_0225]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAATGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAATGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56.497 |
100 |
0.641 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50 |
100 |
0.545 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
33.333 |
100 |
0.378 |
| ssb | Neisseria meningitidis MC58 |
33.526 |
100 |
0.372 |
| ssb | Neisseria gonorrhoeae MS11 |
33.526 |
100 |
0.372 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
47.5 |
76.923 |
0.365 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
47.5 |
76.923 |
0.365 |