Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | CSB82_RS03165 | Genome accession | NZ_CP029664 |
| Coordinates | 581559..582029 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934753.1 | Uniprot ID | A0A1S5YP95 |
| Organism | Staphylococcus aureus strain AR_0226 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 576559..587029
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSB82_RS03125 (CSB82_0562) | - | 576581..576901 (+) | 321 | WP_001120199.1 | DUF771 domain-containing protein | - |
| CSB82_RS03130 | - | 576898..577059 (+) | 162 | WP_001285960.1 | DUF1270 domain-containing protein | - |
| CSB82_RS03135 (CSB82_0563) | - | 577154..577473 (+) | 320 | Protein_581 | DUF2482 family protein | - |
| CSB82_RS03140 (CSB82_0564) | - | 577454..577714 (+) | 261 | WP_000291513.1 | DUF1108 family protein | - |
| CSB82_RS03145 | - | 577723..577986 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| CSB82_RS03150 (CSB82_0565) | - | 577995..579938 (+) | 1944 | WP_000700561.1 | AAA family ATPase | - |
| CSB82_RS03155 (CSB82_0566) | - | 579940..580860 (+) | 921 | WP_000138475.1 | recombinase RecT | - |
| CSB82_RS03160 (CSB82_0567) | - | 580941..581558 (+) | 618 | WP_071665632.1 | MBL fold metallo-hydrolase | - |
| CSB82_RS03165 (CSB82_0568) | ssbA | 581559..582029 (+) | 471 | WP_000934753.1 | single-stranded DNA-binding protein | Machinery gene |
| CSB82_RS03170 (CSB82_0569) | - | 582059..582952 (+) | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| CSB82_RS03175 (CSB82_0570) | - | 582959..583177 (+) | 219 | WP_000338530.1 | hypothetical protein | - |
| CSB82_RS03180 (CSB82_0571) | - | 583186..583590 (+) | 405 | WP_000401977.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CSB82_RS03185 (CSB82_0572) | - | 583603..583971 (+) | 369 | WP_000101288.1 | SA1788 family PVL leukocidin-associated protein | - |
| CSB82_RS03190 (CSB82_0573) | - | 583975..584217 (+) | 243 | WP_000131383.1 | phi PVL orf 51-like protein | - |
| CSB82_RS03195 (CSB82_0574) | - | 584226..584597 (+) | 372 | WP_001549172.1 | hypothetical protein | - |
| CSB82_RS03200 (CSB82_0575) | - | 584590..584826 (+) | 237 | WP_001065101.1 | DUF1024 family protein | - |
| CSB82_RS03205 (CSB82_0576) | - | 584816..585058 (+) | 243 | WP_000700108.1 | hypothetical protein | - |
| CSB82_RS03210 (CSB82_0577) | - | 585051..585584 (+) | 534 | WP_000181819.1 | dUTP pyrophosphatase | - |
| CSB82_RS03215 (CSB82_0578) | - | 585621..585866 (+) | 246 | WP_001282074.1 | hypothetical protein | - |
| CSB82_RS03220 (CSB82_0579) | - | 585863..586069 (+) | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| CSB82_RS03225 (CSB82_0580) | - | 586066..586452 (+) | 387 | WP_000592207.1 | hypothetical protein | - |
| CSB82_RS03230 (CSB82_0581) | - | 586449..586598 (+) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| CSB82_RS03235 (CSB82_0582) | - | 586598..586798 (+) | 201 | WP_000265043.1 | DUF1514 family protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17668.55 Da Isoelectric Point: 5.2672
>NTDB_id=294825 CSB82_RS03165 WP_000934753.1 581559..582029(+) (ssbA) [Staphylococcus aureus strain AR_0226]
MLNRTILVGRLTRDPELRTTQNGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
MLNRTILVGRLTRDPELRTTQNGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=294825 CSB82_RS03165 WP_000934753.1 581559..582029(+) (ssbA) [Staphylococcus aureus strain AR_0226]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAATGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAATGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56.497 |
100 |
0.641 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50 |
100 |
0.545 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
33.333 |
100 |
0.378 |
| ssb | Neisseria meningitidis MC58 |
33.526 |
100 |
0.372 |
| ssb | Neisseria gonorrhoeae MS11 |
33.526 |
100 |
0.372 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
47.5 |
76.923 |
0.365 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
47.5 |
76.923 |
0.365 |