Detailed information NTG0292259

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: DF184_RS00765
• Genome accession: NZ_CP029398
• Coordinates: 118308..118742 (+)
• Length: 144 a.a.
• NCBI ID: WP_052506926.1
• Uniprot ID: -
• Organism: Streptococcus suis strain HN105
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 113308..123742

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DF184_RS00730 (DF184_00730)	-	114050..114415 (+)	366	WP_002936568.1	DUF1033 family protein	-
DF184_RS00735 (DF184_00735)	-	114450..115400 (-)	951	WP_109371021.1	S66 peptidase family protein	-
DF184_RS00740 (DF184_00740)	comYA	115486..116436 (+)	951	WP_024410900.1	competence type IV pilus ATPase ComGA	Machinery gene
DF184_RS00745 (DF184_00745)	comYB	116348..117385 (+)	1038	WP_275425327.1	competence type IV pilus assembly protein ComGB	Machinery gene
DF184_RS00750 (DF184_00750)	comYC	117387..117668 (+)	282	WP_024385124.1	competence type IV pilus major pilin ComGC	Machinery gene
DF184_RS00755 (DF184_00755)	comGD	117649..118056 (+)	408	WP_109371023.1	competence type IV pilus minor pilin ComGD	-
DF184_RS00760 (DF184_00760)	comYE	118028..118321 (+)	294	WP_044752980.1	competence type IV pilus minor pilin ComGE	Machinery gene
DF184_RS00765 (DF184_00765)	comGF/cglF	118308..118742 (+)	435	WP_052506926.1	competence type IV pilus minor pilin ComGF	Machinery gene
DF184_RS00770 (DF184_00770)	comGG	118720..119130 (+)	411	WP_109371025.1	competence type IV pilus minor pilin ComGG	-
DF184_RS00775 (DF184_00775)	comYH	119187..120140 (+)	954	WP_109371027.1	class I SAM-dependent methyltransferase	Machinery gene
DF184_RS00780 (DF184_00780)	-	120190..121377 (+)	1188	WP_014637319.1	acetate kinase	-
DF184_RS00785 (DF184_00785)	-	121638..122189 (+)	552	WP_014637320.1	folate family ECF transporter S component	-
DF184_RS00790 (DF184_00790)	-	122245..123501 (+)	1257	WP_024401511.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16364.66 Da
• Isoelectric Point: 6.9822

>NTDB_id=292259 DF184_RS00765 WP_052506926.1 118308..118742(+) (comGF/cglF) [Streptococcus suis strain HN105]
MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQADLVKVENGKVYVDKGG
QALAFGKSRSDDFRKTNDRGQGYQPMLYQVDSTAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=292259 DF184_RS00765 WP_052506926.1 118308..118742(+) (comGF/cglF) [Streptococcus suis strain HN105]
TTGTTAAAAAGTAAAATTCCTGCTTTTACTCTCTTGGAATGCTTGGTAGCCTTAGTCATCCTTTCAGGTAGTCTTCTGGT
TTTTGAAGGCTTGTCAAAACTGCTGGTCCAAGAAGCGCATTATCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGTCAATTGCGGTCGGAGTGGGACCAGGCTGACTTGGTCAAGGTTGAAAATGGCAAGGTCTATGTTGATAAGGGAGGG
CAGGCTTTGGCCTTTGGTAAGTCACGGTCGGATGATTTTCGGAAAACAAATGACAGGGGACAGGGCTACCAGCCCATGCT
CTATCAGGTGGATAGCACAGCTATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAATGGAGAGGAGC
GGACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	53.901	97.917	0.528
comGF/cglF	Streptococcus pneumoniae D39	53.901	97.917	0.528
comGF/cglF	Streptococcus pneumoniae R6	53.901	97.917	0.528
comGF/cglF	Streptococcus pneumoniae TIGR4	53.901	97.917	0.528
comGF/cglF	Streptococcus mitis NCTC 12261	53.731	93.056	0.5
comYF	Streptococcus mutans UA140	49.306	100	0.493
comYF	Streptococcus mutans UA159	48.611	100	0.486
comGF/cglF	Streptococcus mitis SK321	50.746	93.056	0.472
comGF	Lactococcus lactis subsp. cremoris KW2	46.099	97.917	0.451