Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | C1A23_RS21185 | Genome accession | NZ_CP028568 |
| Coordinates | 4179873..4180193 (+) | Length | 106 a.a. |
| NCBI ID | WP_101616404.1 | Uniprot ID | - |
| Organism | Aeromonas hydrophila subsp. hydrophila strain WCHAH045096 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4174873..4185193
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1A23_RS21160 (C1A23_21120) | - | 4175511..4176146 (-) | 636 | WP_101616397.1 | hemolysin III family protein | - |
| C1A23_RS21165 (C1A23_21125) | - | 4176371..4177876 (+) | 1506 | WP_101616399.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| C1A23_RS21170 (C1A23_21130) | - | 4177981..4178532 (+) | 552 | WP_042067696.1 | septation protein A | - |
| C1A23_RS21175 (C1A23_21135) | - | 4178558..4178854 (+) | 297 | WP_101616401.1 | YciI family protein | - |
| C1A23_RS21180 (C1A23_21140) | cysQ | 4178935..4179705 (-) | 771 | WP_187364530.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| C1A23_RS21185 (C1A23_21145) | comEA | 4179873..4180193 (+) | 321 | WP_101616404.1 | ComEA family DNA-binding protein | Machinery gene |
| C1A23_RS21190 (C1A23_21150) | galU | 4180289..4181200 (+) | 912 | WP_101616406.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| C1A23_RS21195 (C1A23_21155) | - | 4181414..4182811 (+) | 1398 | WP_101616407.1 | peptide MFS transporter | - |
| C1A23_RS21200 (C1A23_21160) | - | 4182885..4183856 (-) | 972 | WP_101616409.1 | response regulator | - |
| C1A23_RS21205 (C1A23_21165) | - | 4184197..4184874 (+) | 678 | WP_101616411.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11211.08 Da Isoelectric Point: 9.5773
>NTDB_id=285558 C1A23_RS21185 WP_101616404.1 4179873..4180193(+) (comEA) [Aeromonas hydrophila subsp. hydrophila strain WCHAH045096]
MNYKTLTATLLLSCLPLLSQPLLAADKPVAKPATTVTAAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPVAKPATTVTAAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=285558 C1A23_RS21185 WP_101616404.1 4179873..4180193(+) (comEA) [Aeromonas hydrophila subsp. hydrophila strain WCHAH045096]
ATGAACTACAAGACTCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTCTGCTGGCCGCCGACAA
GCCTGTTGCCAAGCCGGCAACCACGGTCACCGCCGCCAAGGAGAGCGGCAAGGTGAACCTGAACACCGCCAGTATCAATG
AGTTGACTGCGCTCAAGGGCATTGGCGAGAAAAAGGCCCAGGCCATCGTTGATTACCGCGAGAAGCAGGGCAAGTTCACT
ACCGTGGATCAGCTGGCCGATGTGAGCGGCATCGGGCCAGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
ATGAACTACAAGACTCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTCTGCTGGCCGCCGACAA
GCCTGTTGCCAAGCCGGCAACCACGGTCACCGCCGCCAAGGAGAGCGGCAAGGTGAACCTGAACACCGCCAGTATCAATG
AGTTGACTGCGCTCAAGGGCATTGGCGAGAAAAAGGCCCAGGCCATCGTTGATTACCGCGAGAAGCAGGGCAAGTTCACT
ACCGTGGATCAGCTGGCCGATGTGAGCGGCATCGGGCCAGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
53.636 |
100 |
0.557 |
| comEA | Vibrio cholerae strain A1552 |
53.636 |
100 |
0.557 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
43.243 |
100 |
0.453 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
45.918 |
92.453 |
0.425 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
53.75 |
75.472 |
0.406 |
| comEA | Vibrio campbellii strain DS40M4 |
41 |
94.34 |
0.387 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.316 |
71.698 |
0.368 |
| comEA | Legionella pneumophila str. Paris |
38.235 |
96.226 |
0.368 |
| comEA | Legionella pneumophila strain ERS1305867 |
38.235 |
96.226 |
0.368 |