Detailed information NTG0285499

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: CDG55_RS02460
• Genome accession: NZ_CP028561
• Coordinates: 259782..260840 (+)
• Length: 352 a.a.
• NCBI ID: WP_087535965.1
• Uniprot ID: A0A2R4TH58
• Organism: Acinetobacter sp. WCHA45
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 254782..265840

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CDG55_RS02445 (CDG55_02445)	mraY	255052..256170 (+)	1119	WP_004660135.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
CDG55_RS02450 (CDG55_02450)	-	256229..257047 (+)	819	WP_087535963.1	putative RNA methyltransferase	-
CDG55_RS02455 (CDG55_02455)	ponA	257067..259619 (-)	2553	WP_087535964.1	penicillin-binding protein PBP1a	-
CDG55_RS02460 (CDG55_02460)	comM	259782..260840 (+)	1059	WP_087535965.1	pilus assembly protein PilM	Machinery gene
CDG55_RS02465 (CDG55_02465)	pilN	260840..261463 (+)	624	WP_087535966.1	PilN domain-containing protein	Machinery gene
CDG55_RS02470 (CDG55_02470)	comO	261460..262206 (+)	747	WP_087535967.1	type 4a pilus biogenesis protein PilO	Machinery gene
CDG55_RS02475 (CDG55_02475)	pilP	262206..262733 (+)	528	WP_087535968.1	pilus assembly protein PilP	Machinery gene
CDG55_RS02480 (CDG55_02480)	pilQ	262794..264938 (+)	2145	WP_162620847.1	type IV pilus secretin PilQ family protein	Machinery gene
CDG55_RS02485 (CDG55_02485)	aroK	264949..265515 (+)	567	WP_087535970.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39001.66 Da
• Isoelectric Point: 4.5801

>NTDB_id=285499 CDG55_RS02460 WP_087535965.1 259782..260840(+) (comM) [Acinetobacter sp. WCHA45]
MLRLYRKPNKGLVGVDISSTTVKLLELSVKNGRYWVESYAVMPLPENSVVEKSIINPEAVGDALERVVNLANPHTTNVAI
AVPTSMVINKIIEMDADMTADEREVQIRMDAEQYIPFPLDEVSLDFEVLPDKLANPNRVNVLLVATRTENVDTRVDVLEL
ANLSAKIADVESYAMERAFSVFADTLPIGANTVGILDIGHTMTTLSVMQKGKIIYTREQVFGGRQLTQDVQSRYGLSFEE
AGRAKKERTLPDDYDTEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTISNPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=285499 CDG55_RS02460 WP_087535965.1 259782..260840(+) (comM) [Acinetobacter sp. WCHA45]
GTGCTCAGGTTATATCGTAAACCAAATAAGGGGTTAGTGGGTGTCGATATTAGTTCGACAACTGTTAAGTTATTGGAGCT
CTCTGTAAAGAACGGTAGATATTGGGTTGAAAGCTATGCTGTGATGCCACTGCCTGAAAACAGTGTCGTAGAAAAAAGCA
TCATCAATCCAGAAGCAGTTGGTGACGCGCTTGAAAGAGTCGTTAACCTTGCTAATCCGCATACGACGAATGTGGCTATA
GCTGTGCCAACTTCAATGGTGATTAATAAAATCATTGAAATGGATGCAGATATGACAGCCGATGAACGAGAAGTTCAAAT
TCGTATGGATGCTGAGCAATACATTCCGTTCCCATTGGATGAAGTAAGTCTAGATTTTGAAGTCTTACCTGACAAATTAG
CAAACCCAAATCGTGTAAATGTATTGTTAGTGGCAACGCGTACAGAAAATGTTGACACACGTGTAGATGTTCTTGAGCTG
GCTAATTTATCTGCAAAAATTGCTGATGTTGAAAGTTATGCCATGGAACGTGCTTTCAGTGTATTCGCAGATACTTTGCC
AATAGGTGCAAACACAGTTGGTATTTTAGATATTGGTCATACTATGACCACCTTATCTGTCATGCAGAAAGGTAAAATTA
TCTATACACGTGAACAGGTATTTGGTGGTCGACAGCTAACCCAGGATGTTCAGAGCCGTTACGGTTTGTCTTTTGAAGAG
GCTGGGCGTGCGAAAAAAGAAAGAACACTGCCTGACGACTATGATACGGAAGTGCTCGAACCTTTTTTAGATGCCGTAGT
TCAACAGGCAGCTCGCTCACTTCAGTTTTTCTTTTCATCATCACAGTTCAATGAGATTGACCATATTTTATTGGCAGGTG
GTAATGCCAATATTCCTGGTTTAGCCAAGTTGTTACAACAAAAACTAGGTTATCGCGTCACCATTTCCAATCCATTCTTA
CAAATGGGCTTTTCTCCGCAGATTGATATTAAAAAAATTGAAAATGATGCTTCCTCATTGATGGTTGCATGTGGTTTAGC
ATTGAGGAGTTTTGATTAG

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: A0A2R4TH58

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	87.216	100	0.872
pilM	Acinetobacter baumannii D1279779	86.932	100	0.869
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	40.96	100	0.412