Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   DA456_RS17025 Genome accession   NZ_CP028490
Coordinates   3905697..3906107 (-) Length   136 a.a.
NCBI ID   WP_002551738.1    Uniprot ID   A0AAT9SFQ2
Organism   Pseudomonas syringae pv. atrofaciens strain LMG5095 isolate Triticum aestivum (Aestivum Group)     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3900697..3911107
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DA456_RS17010 (DA456_17005) - 3902638..3904680 (-) 2043 WP_003414357.1 methyl-accepting chemotaxis protein -
  DA456_RS17015 (DA456_17010) - 3904731..3905270 (-) 540 WP_003316742.1 chemotaxis protein CheW -
  DA456_RS17020 (DA456_17015) pilH 3905285..3905650 (-) 366 WP_003316741.1 twitching motility response regulator PilH -
  DA456_RS17025 (DA456_17020) pilG 3905697..3906107 (-) 411 WP_002551738.1 twitching motility response regulator PilG Regulator
  DA456_RS17030 (DA456_17025) gshB 3906362..3907321 (+) 960 WP_003316740.1 glutathione synthase -
  DA456_RS17035 (DA456_17030) - 3907488..3908390 (+) 903 WP_003316738.1 energy transducer TonB -
  DA456_RS17040 (DA456_17035) - 3908466..3909038 (+) 573 WP_003392236.1 YqgE/AlgH family protein -
  DA456_RS17045 (DA456_17040) ruvX 3909038..3909478 (+) 441 WP_002551734.1 Holliday junction resolvase RuvX -
  DA456_RS17050 (DA456_17045) pyrR 3909735..3910247 (+) 513 WP_003316735.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14943.42 Da        Isoelectric Point: 8.5283

>NTDB_id=285306 DA456_RS17025 WP_002551738.1 3905697..3906107(-) (pilG) [Pseudomonas syringae pv. atrofaciens strain LMG5095 isolate Triticum aestivum (Aestivum Group)]
MEQHASALKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIKAHVPGFVAAEQHIS

Nucleotide


Download         Length: 411 bp        

>NTDB_id=285306 DA456_RS17025 WP_002551738.1 3905697..3906107(-) (pilG) [Pseudomonas syringae pv. atrofaciens strain LMG5095 isolate Triticum aestivum (Aestivum Group)]
ATGGAACAACACGCCTCCGCCCTGAAAGTCATGGTCATCGATGATTCGAAGACTATCCGCCGCACCGCCGAAACACTGCT
CAAGAACGCAGGTTGTGAAGTCATCACTGCGATAGACGGTTTCGACGCGCTGGCCAAGATTGCCGATAACCACCCGCGAA
TCATATTCGTCGATATCATGATGCCGCGTCTGGACGGTTATCAGACCTGCGCGCTGATCAAGAACAACCGGGCATTCAAA
TCGACGCCGGTCATCATGCTGTCCTCCAAGGACGGTCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTTAGCGCGATCAAGGCTCATGTGCCGGGCTTCGTTGCAGCAGAACAAC
ACATATCATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

91.912

0.691

Multiple sequence alignment