Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | AM467_RS18035 | Genome accession | NZ_CP027530 |
| Coordinates | 3739163..3739648 (-) | Length | 161 a.a. |
| NCBI ID | WP_000993726.1 | Uniprot ID | A0A242SN80 |
| Organism | Acinetobacter baumannii strain AR_0088 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3734163..3744648
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM467_RS18015 (AM467_18015) | - | 3735820..3736203 (+) | 384 | WP_000090000.1 | RidA family protein | - |
| AM467_RS18020 (AM467_18020) | - | 3736413..3736607 (+) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| AM467_RS18025 (AM467_18025) | bfr | 3736853..3737317 (+) | 465 | WP_000678123.1 | bacterioferritin | - |
| AM467_RS18030 (AM467_18030) | - | 3737359..3738987 (-) | 1629 | WP_002015646.1 | PglL family O-oligosaccharyltransferase | - |
| AM467_RS18035 (AM467_18035) | pilA | 3739163..3739648 (-) | 486 | WP_000993726.1 | pilin | Machinery gene |
| AM467_RS18040 (AM467_18040) | - | 3739990..3740550 (-) | 561 | WP_000258950.1 | TPM domain-containing protein | - |
| AM467_RS18045 (AM467_18045) | - | 3740544..3741626 (-) | 1083 | WP_001246384.1 | TPM domain-containing protein | - |
| AM467_RS18050 (AM467_18050) | - | 3741648..3742238 (-) | 591 | WP_000846931.1 | LemA family protein | - |
| AM467_RS18055 (AM467_18055) | - | 3742368..3743255 (-) | 888 | WP_001017328.1 | metal-dependent hydrolase | - |
Sequence
Protein
Download Length: 161 a.a. Molecular weight: 16591.91 Da Isoelectric Point: 5.0937
>NTDB_id=277789 AM467_RS18035 WP_000993726.1 3739163..3739648(-) (pilA) [Acinetobacter baumannii strain AR_0088]
MNAQKGFTLIELMIVVAIIGILAAIAIPQYQNYVGRSNVAAAVQTLTSNKSGLESYVMEFGEFPDGTTAPAAGDPTANPP
VAATRGERPQDLGIVNTTLGSIALGDKNNGAGIITLTFATGNPGIKGKKVQLARDANGTWTCVTDVDEKFAAKACPVGTP
Q
MNAQKGFTLIELMIVVAIIGILAAIAIPQYQNYVGRSNVAAAVQTLTSNKSGLESYVMEFGEFPDGTTAPAAGDPTANPP
VAATRGERPQDLGIVNTTLGSIALGDKNNGAGIITLTFATGNPGIKGKKVQLARDANGTWTCVTDVDEKFAAKACPVGTP
Q
Nucleotide
Download Length: 486 bp
>NTDB_id=277789 AM467_RS18035 WP_000993726.1 3739163..3739648(-) (pilA) [Acinetobacter baumannii strain AR_0088]
ATGAATGCACAAAAAGGTTTTACGTTAATTGAACTCATGATCGTGGTTGCCATTATCGGTATCTTGGCAGCAATTGCGAT
TCCGCAATATCAAAATTATGTGGGTCGCTCTAATGTAGCAGCAGCTGTCCAAACACTTACATCAAATAAATCTGGTTTAG
AAAGTTATGTAATGGAATTTGGTGAATTCCCTGACGGTACTACGGCTCCAGCTGCAGGAGATCCAACAGCGAACCCACCA
GTAGCTGCTACTCGAGGTGAGCGACCACAGGATTTAGGTATTGTTAATACAACATTAGGAAGTATTGCTTTAGGTGATAA
AAACAATGGAGCTGGCATTATCACTTTAACATTTGCGACAGGCAATCCTGGTATTAAAGGCAAAAAGGTTCAGTTAGCTC
GTGATGCAAATGGAACTTGGACATGTGTAACTGATGTTGATGAGAAATTTGCAGCCAAAGCTTGTCCAGTAGGAACACCA
CAATAA
ATGAATGCACAAAAAGGTTTTACGTTAATTGAACTCATGATCGTGGTTGCCATTATCGGTATCTTGGCAGCAATTGCGAT
TCCGCAATATCAAAATTATGTGGGTCGCTCTAATGTAGCAGCAGCTGTCCAAACACTTACATCAAATAAATCTGGTTTAG
AAAGTTATGTAATGGAATTTGGTGAATTCCCTGACGGTACTACGGCTCCAGCTGCAGGAGATCCAACAGCGAACCCACCA
GTAGCTGCTACTCGAGGTGAGCGACCACAGGATTTAGGTATTGTTAATACAACATTAGGAAGTATTGCTTTAGGTGATAA
AAACAATGGAGCTGGCATTATCACTTTAACATTTGCGACAGGCAATCCTGGTATTAAAGGCAAAAAGGTTCAGTTAGCTC
GTGATGCAAATGGAACTTGGACATGTGTAACTGATGTTGATGAGAAATTTGCAGCCAAAGCTTGTCCAGTAGGAACACCA
CAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
48.75 |
99.379 |
0.484 |
| pilA | Pseudomonas aeruginosa PAK |
46.541 |
98.758 |
0.46 |
| pilA | Vibrio cholerae C6706 |
45.86 |
97.516 |
0.447 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
45.86 |
97.516 |
0.447 |
| pilA | Vibrio cholerae strain A1552 |
45.86 |
97.516 |
0.447 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
41.558 |
95.652 |
0.398 |
| pilE | Neisseria gonorrhoeae MS11 |
37.736 |
98.758 |
0.373 |
| comP | Acinetobacter baylyi ADP1 |
36.709 |
98.137 |
0.36 |