Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   C3496_RS23805 Genome accession   NZ_CP026608
Coordinates   4682599..4683837 (-) Length   412 a.a.
NCBI ID   WP_071727201.1    Uniprot ID   A0A243BAI1
Organism   Bacillus anthracis strain HDZK-BYSB7     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 4677599..4688837
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C3496_RS23780 (C3496_24990) spoVS 4677683..4677943 (-) 261 WP_000404341.1 stage V sporulation protein SpoVS -
  C3496_RS23785 (C3496_24995) - 4678092..4678886 (-) 795 WP_001221095.1 TIGR00282 family metallophosphoesterase -
  C3496_RS23790 (C3496_25000) rny 4679052..4680614 (-) 1563 WP_000099773.1 ribonuclease Y -
  C3496_RS23795 (C3496_25005) - 4681096..4681518 (-) 423 Protein_4667 DNA recombination/repair protein RecA -
  C3496_RS23800 (C3496_25010) recA 4681846..4682454 (-) 609 Protein_4668 recombinase RecA -
  C3496_RS23805 (C3496_25015) cinA 4682599..4683837 (-) 1239 WP_071727201.1 competence/damage-inducible protein CinA Machinery gene
  C3496_RS23810 (C3496_25020) pgsA 4683858..4684436 (-) 579 WP_001052964.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  C3496_RS23815 (C3496_25025) - 4684500..4685411 (-) 912 WP_071727200.1 helix-turn-helix domain-containing protein -
  C3496_RS23820 (C3496_25030) - 4685433..4686218 (-) 786 WP_000574107.1 DUF3388 domain-containing protein -
  C3496_RS23825 (C3496_25035) - 4686358..4686606 (-) 249 WP_000114454.1 DUF3243 domain-containing protein -
  C3496_RS23830 (C3496_25040) ymfI 4686682..4687395 (-) 714 WP_071727199.1 elongation factor P 5-aminopentanone reductase -
  C3496_RS23835 (C3496_25045) yfmH 4687499..4688785 (-) 1287 WP_088667288.1 EF-P 5-aminopentanol modification-associated protein YfmH -

Sequence

Protein


Download         Length: 412 a.a.        Molecular weight: 45398.65 Da        Isoelectric Point: 5.0308

>NTDB_id=270712 C3496_RS23805 WP_071727201.1 4682599..4683837(-) (cinA) [Bacillus anthracis strain HDZK-BYSB7]
MNAEIIAVGTELLLGQIANTNAQFLSEKLASIGINVYYHTVVGDNNKRLQQAIEVAEERADMLIFTGGLGPTKDDLTKET
IASSLAEELVYDEKALASISDYFKRTGREFTENNKKQALVLDGATVFANDHGMAPGMGLNKNGKVYILLPGPPKEMKPMY
VSYVEPFLRNFTTGENIYSRVLRFFGIGESQLEVKVQDLIDGQTNPTIAPLANDGEVTLRLTAKHQNVDEAEKLIQHVED
LILERVGEFFYGYDQEFLHYKAIELLKKKGLTLACAESLTGGLFGNQVTESAGVSSVFKGGVICYHNDVKQHVLHVPEEV
LSTDGAVSKECARYLAENVKELLKADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIRERSAKY
GFYHLYKKLEEI

Nucleotide


Download         Length: 1239 bp        

>NTDB_id=270712 C3496_RS23805 WP_071727201.1 4682599..4683837(-) (cinA) [Bacillus anthracis strain HDZK-BYSB7]
ATGAACGCTGAAATCATTGCGGTTGGAACAGAATTATTACTTGGACAAATTGCAAATACGAACGCCCAGTTTTTATCTGA
AAAGTTAGCTTCAATTGGAATTAACGTGTACTACCATACTGTAGTTGGTGATAATAACAAGCGACTGCAGCAGGCGATTG
AAGTTGCAGAAGAACGTGCGGATATGCTCATTTTCACAGGTGGATTAGGACCGACAAAAGATGATTTAACGAAGGAAACA
ATAGCGTCTAGCTTAGCGGAAGAGCTTGTATATGATGAAAAGGCATTAGCATCAATAAGCGATTACTTTAAGCGAACAGG
TCGAGAGTTCACGGAGAATAATAAAAAGCAGGCGCTCGTTTTGGATGGAGCAACTGTATTTGCAAATGATCACGGTATGG
CACCTGGTATGGGATTAAATAAGAACGGAAAAGTTTATATTTTATTACCAGGACCACCGAAAGAAATGAAGCCGATGTAT
GTAAGTTATGTGGAGCCTTTTTTACGTAACTTTACAACAGGAGAAAACATTTATTCTCGCGTGCTTCGCTTTTTCGGAAT
TGGGGAATCTCAATTAGAGGTGAAAGTTCAAGATTTAATTGATGGACAAACGAATCCGACAATTGCCCCACTTGCGAATG
ATGGAGAAGTGACATTACGTTTAACTGCTAAACATCAAAATGTTGATGAAGCAGAGAAACTCATTCAGCATGTGGAAGAT
TTGATTTTAGAAAGAGTAGGAGAATTTTTCTACGGGTATGACCAAGAGTTTCTGCATTATAAGGCGATAGAGTTATTGAA
GAAAAAAGGATTAACTTTAGCGTGTGCGGAAAGTTTAACAGGTGGTCTCTTCGGTAATCAAGTAACAGAAAGTGCTGGTG
TGTCTTCCGTATTTAAAGGCGGTGTCATTTGTTATCATAATGATGTGAAGCAACATGTTTTACATGTACCTGAGGAAGTG
TTGTCTACTGATGGTGCAGTTAGTAAAGAATGTGCCCGTTATCTTGCTGAAAATGTTAAAGAATTATTAAAAGCGGATAT
CGGGATTAGTTTCACTGGGGTAGCAGGACCGGATGCTTCAGAACATAAAGAACCGGGAACAGTATTTGTTGGATTGGCGA
TTAAAGATGAACCAACTGTAGTCTTTCCTCTTAATTTAAGTGGAAGTCGCCAACAAATTAGAGAACGCTCAGCGAAATAT
GGATTTTATCATTTATATAAAAAGCTAGAAGAAATATAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(258-408)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)

Damage-inducible protein CinA KH domain (CinA_KH)

(179-252)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A243BAI1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

58.981

100

0.59
  cinA Streptococcus mitis SK321

47.255

100

0.481
  cinA Streptococcus pneumoniae TIGR4

47.017

100

0.478
  cinA Streptococcus pneumoniae Rx1

46.539

100

0.473
  cinA Streptococcus pneumoniae R6

46.539

100

0.473
  cinA Streptococcus pneumoniae D39

46.301

100

0.471
  cinA Streptococcus mitis NCTC 12261

46.301

100

0.471
  cinA Streptococcus mutans UA159

45.567

98.544

0.449
  cinA Streptococcus suis isolate S10

41.27

91.748

0.379

Multiple sequence alignment