Detailed information
Bioinformatically predicted
Overview
| Name | comP | Type | Machinery gene |
| Locus tag | C3F34_RS08220 | Genome accession | NZ_CP026412 |
| Coordinates | 1768003..1768449 (+) | Length | 148 a.a. |
| NCBI ID | WP_104441389.1 | Uniprot ID | A0A2L0HUQ7 |
| Organism | Acinetobacter sp. ACNIH2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1763003..1773449
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C3F34_RS08200 (C3F34_08200) | - | 1764498..1765376 (+) | 879 | WP_044739689.1 | metal-dependent hydrolase | - |
| C3F34_RS08205 (C3F34_08205) | - | 1765519..1766109 (+) | 591 | WP_044739688.1 | LemA family protein | - |
| C3F34_RS08210 (C3F34_08210) | - | 1766136..1767185 (+) | 1050 | WP_104441388.1 | TPM domain-containing protein | - |
| C3F34_RS08215 (C3F34_08215) | - | 1767179..1767739 (+) | 561 | WP_044739686.1 | TPM domain-containing protein | - |
| C3F34_RS08220 (C3F34_08220) | comP | 1768003..1768449 (+) | 447 | WP_104441389.1 | pilin | Machinery gene |
| C3F34_RS08225 (C3F34_08225) | - | 1768672..1769112 (+) | 441 | WP_044739684.1 | pilin | - |
| C3F34_RS08230 (C3F34_08230) | - | 1769227..1770900 (+) | 1674 | WP_104441390.1 | PglL family O-oligosaccharyltransferase | - |
| C3F34_RS08235 (C3F34_08235) | - | 1771074..1772702 (+) | 1629 | WP_044739682.1 | PglL family O-oligosaccharyltransferase | - |
| C3F34_RS08240 (C3F34_08240) | bfr | 1772744..1773208 (-) | 465 | WP_016168691.1 | heteropolymeric bacterioferritin subunit Bfr | - |
Sequence
Protein
Download Length: 148 a.a. Molecular weight: 15541.97 Da Isoelectric Point: 8.9860
>NTDB_id=269187 C3F34_RS08220 WP_104441389.1 1768003..1768449(+) (comP) [Acinetobacter sp. ACNIH2]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQDYIVRSKVTEGLNLASSYKTIIAENAGNGASNLTLGIPNFAATDNVASI
TPNATTGAIVIVYTDKAKSVELTLTPFDGKEGGTAIKNKTVPTNQITWVCKVKQPADNAKYVPANCRG
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQDYIVRSKVTEGLNLASSYKTIIAENAGNGASNLTLGIPNFAATDNVASI
TPNATTGAIVIVYTDKAKSVELTLTPFDGKEGGTAIKNKTVPTNQITWVCKVKQPADNAKYVPANCRG
Nucleotide
Download Length: 447 bp
>NTDB_id=269187 C3F34_RS08220 WP_104441389.1 1768003..1768449(+) (comP) [Acinetobacter sp. ACNIH2]
ATGAACGCTCAAAAGGGTTTTACTCTTATTGAATTAATGATCGTAGTTGCTATTATCGGTATTTTGGCGGCTATCGCGAT
TCCTGCTTATCAAGATTACATCGTACGTTCAAAAGTAACAGAAGGTTTGAACTTGGCGTCTTCTTATAAAACTATTATTG
CTGAAAATGCAGGTAATGGTGCGTCTAATTTAACTTTAGGTATTCCTAATTTTGCTGCGACAGATAACGTTGCAAGTATT
ACTCCTAATGCAACTACTGGTGCTATCGTTATTGTATATACTGATAAGGCTAAATCTGTTGAATTAACATTAACCCCATT
TGATGGCAAAGAGGGTGGTACTGCTATCAAAAATAAAACTGTTCCTACAAACCAAATTACATGGGTATGTAAAGTTAAAC
AGCCAGCGGACAATGCAAAATATGTTCCTGCAAACTGCCGCGGTTAA
ATGAACGCTCAAAAGGGTTTTACTCTTATTGAATTAATGATCGTAGTTGCTATTATCGGTATTTTGGCGGCTATCGCGAT
TCCTGCTTATCAAGATTACATCGTACGTTCAAAAGTAACAGAAGGTTTGAACTTGGCGTCTTCTTATAAAACTATTATTG
CTGAAAATGCAGGTAATGGTGCGTCTAATTTAACTTTAGGTATTCCTAATTTTGCTGCGACAGATAACGTTGCAAGTATT
ACTCCTAATGCAACTACTGGTGCTATCGTTATTGTATATACTGATAAGGCTAAATCTGTTGAATTAACATTAACCCCATT
TGATGGCAAAGAGGGTGGTACTGCTATCAAAAATAAAACTGTTCCTACAAACCAAATTACATGGGTATGTAAAGTTAAAC
AGCCAGCGGACAATGCAAAATATGTTCCTGCAAACTGCCGCGGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comP | Acinetobacter baylyi ADP1 |
47.561 |
100 |
0.527 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
47.5 |
100 |
0.514 |
| pilA2 | Legionella pneumophila str. Paris |
49.664 |
100 |
0.5 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
49.664 |
100 |
0.5 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
37.838 |
100 |
0.473 |
| pilA | Acinetobacter baumannii strain A118 |
42.667 |
100 |
0.432 |
| pilA | Pseudomonas aeruginosa PAK |
34.524 |
100 |
0.392 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
38.514 |
100 |
0.385 |