Detailed information NTG0268808

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: BV11031_RS05125
• Genome accession: NZ_CP026362
• Coordinates: 944944..945561 (+)
• Length: 205 a.a.
• NCBI ID: WP_010330727.1
• Uniprot ID: -
• Organism: Bacillus vallismortis strain DSM 11031
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 939944..950561

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BV11031_RS05090 (BV11031_05065)	aroE	940602..941444 (+)	843	WP_010330733.1	shikimate dehydrogenase	-
BV11031_RS05095 (BV11031_05070)	yhbY	941438..941728 (+)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-
BV11031_RS05100 (BV11031_05075)	-	941740..942309 (+)	570	WP_010330732.1	nicotinate-nucleotide adenylyltransferase	-
BV11031_RS05105 (BV11031_05080)	yqeK	942299..942859 (+)	561	WP_010330731.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
BV11031_RS05110 (BV11031_05085)	rsfS	942877..943233 (+)	357	WP_010330730.1	ribosome silencing factor	-
BV11031_RS05115 (BV11031_05090)	-	943230..943973 (+)	744	WP_010330729.1	class I SAM-dependent methyltransferase	-
BV11031_RS05120 (BV11031_05095)	comER	944039..944860 (-)	822	WP_010330728.1	late competence protein ComER	-
BV11031_RS05125 (BV11031_05100)	comEA	944944..945561 (+)	618	WP_010330727.1	helix-hairpin-helix domain-containing protein	Machinery gene
BV11031_RS05130 (BV11031_05105)	-	945628..946197 (+)	570	WP_010330726.1	ComE operon protein 2	-
BV11031_RS05135 (BV11031_05110)	comEC	946201..948516 (+)	2316	WP_026014547.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
BV11031_RS05140 (BV11031_05115)	-	948571..948705 (-)	135	WP_003229983.1	YqzM family protein	-
BV11031_RS05145	-	948746..948895 (+)	150	WP_121642933.1	hypothetical protein	-
BV11031_RS05150 (BV11031_05120)	holA	948935..949978 (+)	1044	WP_010330724.1	DNA polymerase III subunit delta	-
BV11031_RS05155 (BV11031_05125)	rpsT	949993..950259 (-)	267	WP_010330723.1	30S ribosomal protein S20	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 22130.89 Da
• Isoelectric Point: 4.4900

>NTDB_id=268808 BV11031_RS05125 WP_010330727.1 944944..945561(+) (comEA) [Bacillus vallismortis strain DSM 11031]
MNWLIQHKKAIILAAFAAAFIAVIFFLASRENKEPVKQAVSTETENPEVKQEAVKDDSDDTIVIDIKGAVQHPGVYEMQT
GDRVSQAIEKAGGASEQADEMQVNLAELLQDGTVVYIPKKGEEESGRQVSGDDVRSGGGKEALVNINTATLEELQGIPGV
GPSKAEAIIAYREENGRFQTIEEITKVSGIGEKSFDKIKSSITVK

Nucleotide

• Length: 618 bp

>NTDB_id=268808 BV11031_RS05125 WP_010330727.1 944944..945561(+) (comEA) [Bacillus vallismortis strain DSM 11031]
ATGAATTGGTTGATCCAGCATAAAAAAGCAATCATTTTAGCGGCTTTTGCGGCTGCTTTCATAGCGGTTATTTTCTTCTT
GGCCAGCAGGGAAAACAAAGAGCCGGTAAAGCAGGCTGTATCAACTGAGACAGAAAATCCGGAGGTAAAGCAGGAGGCCG
TAAAAGACGATTCAGACGATACCATTGTGATTGATATAAAAGGGGCTGTCCAGCATCCCGGCGTTTATGAGATGCAAACA
GGGGACAGAGTATCTCAGGCAATTGAGAAAGCGGGCGGGGCCAGTGAACAAGCAGATGAGATGCAAGTTAACTTGGCGGA
GCTGCTGCAGGACGGGACAGTGGTGTATATTCCGAAAAAGGGAGAGGAGGAATCGGGGCGGCAAGTGTCCGGAGACGATG
TGAGAAGCGGCGGCGGGAAAGAAGCACTGGTAAATATCAATACAGCAACCTTAGAGGAATTACAAGGCATCCCAGGGGTG
GGACCATCAAAAGCTGAAGCTATTATCGCATACCGTGAAGAAAACGGGCGTTTCCAGACAATTGAAGAGATCACGAAGGT
GTCGGGAATCGGTGAGAAGTCGTTTGATAAAATAAAGTCTTCCATTACAGTAAAGTGA

Domains

Predicted by InterproScan.

• SLBB domain (SLBB) (63-118)

• Helix-hairpin-helix motif (HHH_3) (141-203)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	82.439	100	0.824
comEA	Staphylococcus aureus MW2	39.171	100	0.415
comEA	Staphylococcus aureus N315	37.788	100	0.4
comEA/celA/cilE	Streptococcus mitis SK321	39.706	99.512	0.395
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	38.571	100	0.395
comEA/celA/cilE	Streptococcus pneumoniae Rx1	38.537	100	0.385
comEA/celA/cilE	Streptococcus pneumoniae D39	38.537	100	0.385
comEA/celA/cilE	Streptococcus pneumoniae R6	38.537	100	0.385