Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   SSA_RS02395 Genome accession   NC_009009
Coordinates   462748..463206 (+) Length   152 a.a.
NCBI ID   WP_002913878.1    Uniprot ID   A0ABS5ATY1
Organism   Streptococcus sanguinis SK36     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 457748..468206
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSA_RS02375 (SSA_0456) - 458735..460645 (+) 1911 WP_011836524.1 sucrose-specific PTS transporter subunit IIBC -
  SSA_RS02380 (SSA_0457) scrK 460803..461702 (+) 900 WP_002907200.1 fructokinase ScrK -
  SSA_RS02385 (SSA_0458) - 461749..462159 (+) 411 WP_011836525.1 peptide deformylase -
  SSA_RS02390 (SSA_0459) - 462238..462573 (+) 336 WP_002903845.1 hypothetical protein -
  SSA_RS02395 (SSA_0460) rcrR 462748..463206 (+) 459 WP_002913878.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  SSA_RS02400 (SSA_0461) rcrP 463199..464965 (+) 1767 WP_011836526.1 ABC transporter ATP-binding protein Regulator
  SSA_RS02405 (SSA_0462) rcrQ 464955..466712 (+) 1758 WP_011836527.1 ABC transporter ATP-binding protein Regulator

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17489.43 Da        Isoelectric Point: 8.8901

>NTDB_id=26263 SSA_RS02395 WP_002913878.1 462748..463206(+) (rcrR) [Streptococcus sanguinis SK36]
MDKPLLELKRFGRKIHLIAEKLAKEQGIESMAGPQGQVLHIVACRMEEGKDTLIKDIEQELDISKSVASNLMKRMEKNGF
IKLEMGKTDKRAKYIRLTPQSQERMKKIRDFFDEMNLSILNGVSEQELLIFSQVMAKFYQNIESLENGGKDV

Nucleotide


Download         Length: 459 bp        

>NTDB_id=26263 SSA_RS02395 WP_002913878.1 462748..463206(+) (rcrR) [Streptococcus sanguinis SK36]
ATGGATAAGCCTTTACTGGAATTGAAGCGTTTTGGACGAAAGATTCATCTCATAGCGGAAAAGCTTGCCAAGGAGCAAGG
GATTGAGTCCATGGCTGGGCCTCAGGGGCAGGTCTTGCATATTGTCGCCTGTCGTATGGAAGAGGGGAAGGATACCCTTA
TCAAGGATATTGAGCAGGAGTTGGATATTTCCAAATCGGTGGCCTCTAACTTAATGAAAAGGATGGAGAAGAATGGCTTT
ATCAAGCTGGAAATGGGCAAGACAGACAAGCGGGCTAAATATATCCGTCTCACTCCGCAGTCGCAGGAAAGAATGAAAAA
AATCCGTGACTTTTTTGATGAAATGAACCTTTCTATTTTGAATGGTGTTTCTGAGCAGGAACTGCTGATTTTTTCTCAAG
TCATGGCCAAGTTTTATCAGAATATCGAAAGTTTAGAAAATGGAGGGAAAGATGTTTAA

Domains

Predicted by InterProScan.

Winged helix DNA-binding domain (HTH_27)

(33-99)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

39.726

96.053

0.382

Multiple sequence alignment