Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SSA_RS02310 Genome accession   NC_009009
Coordinates   442377..443090 (+) Length   237 a.a.
NCBI ID   WP_011836515.1    Uniprot ID   A3CL36
Organism   Streptococcus sanguinis SK36     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 437377..448090
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSA_RS02285 (SSA_0436) hutI 439009..440274 (+) 1266 WP_011836513.1 imidazolonepropionase -
  SSA_RS02290 (SSA_0437) rpsF 440453..440743 (+) 291 WP_002896497.1 30S ribosomal protein S6 -
  SSA_RS02295 (SSA_0438) ssbA 440755..441249 (+) 495 WP_002896496.1 single-stranded DNA-binding protein Machinery gene
  SSA_RS02300 (SSA_0440) rpsR 441286..441525 (+) 240 WP_000068664.1 30S ribosomal protein S18 -
  SSA_RS02305 (SSA_0441) - 441579..442235 (+) 657 WP_164925986.1 TetR/AcrR family transcriptional regulator -
  SSA_RS02310 (SSA_0442) pptA 442377..443090 (+) 714 WP_011836515.1 ABC transporter ATP-binding protein Regulator
  SSA_RS02315 (SSA_0443) - 443017..444627 (+) 1611 WP_011836516.1 ABC transporter permease -
  SSA_RS02320 (SSA_0445) - 444627..444836 (+) 210 WP_002898286.1 DUF1648 domain-containing protein -
  SSA_RS02325 (SSA_0446) - 444854..445528 (-) 675 WP_011836517.1 DUF1129 domain-containing protein -
  SSA_RS02330 (SSA_0447) - 445547..446491 (-) 945 WP_002898284.1 magnesium transporter CorA family protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 26555.73 Da        Isoelectric Point: 6.3866

>NTDB_id=26261 SSA_RS02310 WP_011836515.1 442377..443090(+) (pptA) [Streptococcus sanguinis SK36]
MLKIEHLTKVYSNGKKAVDDLSLIVEPGDIYGFIGANGAGKTSTIKSIVGIHDFDKGEIYICGHSIRKEPLLCKKKMAFL
PDNPDLYKNLTARQFLDFVADIYRVSLEKRQAAIEKYSKMFELDTSLDQLISAYSHGMKQRLALIAALLHEPELLILDEP
FVGLDPKGAYYFKQIMRELASQGHAIFFSTHVLEVAEELCNKVAILQKGRLVANGRTSEVKGASSLEQVFMELQEDD

Nucleotide


Download         Length: 714 bp        

>NTDB_id=26261 SSA_RS02310 WP_011836515.1 442377..443090(+) (pptA) [Streptococcus sanguinis SK36]
ATGTTAAAAATAGAACATTTAACAAAAGTATATAGCAACGGTAAAAAGGCAGTGGACGATCTTAGTCTGATAGTGGAGCC
TGGGGATATTTATGGCTTCATTGGCGCTAATGGAGCAGGTAAAACATCTACCATTAAGTCCATTGTGGGGATTCATGATT
TCGATAAAGGGGAGATTTATATCTGCGGGCACTCTATCAGGAAGGAGCCCTTGCTTTGTAAGAAAAAGATGGCGTTTCTG
CCGGATAACCCAGACCTTTATAAAAATCTGACTGCAAGGCAGTTTTTGGACTTTGTAGCAGATATTTATAGAGTTTCTTT
GGAAAAAAGGCAAGCGGCTATAGAAAAGTATTCTAAAATGTTTGAGCTGGATACGTCTTTGGATCAATTGATATCAGCTT
ATTCACATGGAATGAAGCAGCGATTGGCACTAATAGCGGCCCTCTTGCATGAGCCAGAATTACTGATTTTAGACGAACCT
TTTGTCGGTTTAGATCCGAAAGGCGCATATTATTTTAAGCAGATCATGAGAGAGCTAGCAAGTCAAGGGCATGCGATTTT
CTTTTCTACTCACGTTTTAGAGGTTGCGGAAGAACTCTGCAATAAGGTAGCAATTCTGCAAAAGGGACGTTTGGTGGCTA
ATGGAAGGACCTCTGAAGTTAAGGGGGCATCCAGTTTGGAACAAGTATTTATGGAGTTACAGGAAGATGACTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3CL36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

36.555

100

0.367
  pptA Streptococcus salivarius strain HSISS4

36.555

100

0.367

Multiple sequence alignment