Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   CR921_RS01120 Genome accession   NZ_CP025399
Coordinates   197056..198318 (+) Length   420 a.a.
NCBI ID   WP_011680685.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain GABA     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 192056..203318
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CR921_RS01095 - 192637..193986 (+) 1350 WP_101415521.1 glucose-6-phosphate isomerase -
  CR921_RS01100 - 194174..194890 (+) 717 WP_002949309.1 YebC/PmpR family DNA-binding transcriptional regulator -
  CR921_RS01105 - 195016..195354 (+) 339 WP_011225395.1 preprotein translocase subunit YajC -
  CR921_RS01110 - 195483..196232 (+) 750 WP_002949314.1 isoprenyl transferase -
  CR921_RS01115 - 196245..197039 (+) 795 WP_011680684.1 phosphatidate cytidylyltransferase -
  CR921_RS01120 eeP 197056..198318 (+) 1263 WP_011680685.1 RIP metalloprotease RseP Regulator
  CR921_RS01125 - 198389..200251 (+) 1863 WP_024704167.1 proline--tRNA ligase -
  CR921_RS01130 - 200868..202808 (+) 1941 WP_101415522.1 ABC transporter substrate binding protein -

Sequence

Protein


Download         Length: 420 a.a.        Molecular weight: 45621.05 Da        Isoelectric Point: 6.5104

>NTDB_id=260911 CR921_RS01120 WP_011680685.1 197056..198318(+) (eeP) [Streptococcus thermophilus strain GABA]
MKAIITFLLIFCVIVVFHEFGHFFFAKRSGILVREFAIGMGPKIFAHTGKDGTVYTIRILPLGGYVRMAGWGEDTTEIKT
GSPASLTLGKDGKVRRINLSDRQVDQTALPMNVTAYDLEDKLTITGLVLGETKTYEVDHDATIVEEDGTELRIAPKDVQY
QNASIWGRLITNFAGPMNNFILGVLVFIILAFVQGGVQDTSTNLIQVANGGAAQVSGLKTGDAIVAINKDKVTDWDSLKE
ALRENTQKFSKGDSLSVTVKRSNGQEETISVKPQESQGSYFLGVSPVLKTGLKDKIFGGFQMAWEGATAILATLKGLITN
FSLNKLGGPVAMFQMSAQASESGLISILDLMGMLSINLGIFNLIPIPALDGGKIVMNIIEAIRRKPLNQEIESYITLAGV
AVMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=260911 CR921_RS01120 WP_011680685.1 197056..198318(+) (eeP) [Streptococcus thermophilus strain GABA]
ATGAAAGCTATTATTACTTTTTTACTGATTTTCTGTGTGATTGTCGTCTTCCATGAGTTTGGCCATTTCTTCTTTGCCAA
ACGATCAGGCATTCTGGTGCGTGAATTTGCCATTGGGATGGGTCCTAAAATTTTTGCACACACTGGTAAGGATGGTACCG
TTTATACTATTCGTATCCTTCCTTTGGGTGGTTATGTGCGTATGGCTGGTTGGGGTGAAGATACAACTGAGATTAAAACG
GGGAGTCCTGCTAGCCTAACGCTTGGAAAAGATGGCAAAGTGAGACGTATCAATCTTTCAGATCGTCAGGTTGACCAGAC
GGCTTTGCCTATGAACGTTACTGCCTATGATTTGGAAGATAAGTTAACTATTACTGGTCTTGTCCTAGGTGAGACCAAGA
CCTATGAGGTTGACCATGATGCCACTATCGTTGAGGAAGACGGTACGGAGCTTCGTATTGCTCCTAAGGATGTCCAATAT
CAAAATGCTAGCATTTGGGGACGTTTAATTACCAATTTCGCTGGTCCTATGAACAACTTTATTCTTGGGGTCTTGGTCTT
TATTATCCTTGCCTTTGTTCAAGGTGGTGTTCAAGATACGTCGACCAACCTTATCCAGGTGGCTAATGGTGGTGCTGCCC
AGGTGTCAGGTTTGAAAACTGGTGATGCCATCGTGGCCATTAACAAGGACAAGGTTACTGACTGGGACAGCTTGAAAGAA
GCATTGAGAGAGAATACCCAAAAATTCTCGAAAGGCGACAGCCTTTCTGTGACGGTTAAGAGAAGTAATGGTCAGGAAGA
AACTATTTCTGTTAAACCCCAAGAGAGCCAAGGAAGCTACTTTTTAGGTGTCTCTCCTGTCTTAAAGACAGGTCTTAAAG
ATAAGATTTTTGGTGGTTTCCAAATGGCTTGGGAAGGTGCGACGGCAATCCTCGCTACGCTCAAAGGGCTCATTACCAAC
TTTAGCTTGAACAAGCTTGGTGGACCGGTTGCTATGTTCCAGATGTCTGCACAAGCCTCAGAAAGTGGGTTGATTTCCAT
TCTTGACCTTATGGGAATGCTCTCTATCAACTTAGGGATTTTCAATCTTATTCCAATTCCAGCCCTTGACGGTGGTAAAA
TTGTTATGAATATTATTGAAGCTATTCGTCGTAAACCACTTAATCAAGAAATTGAAAGCTATATCACACTCGCAGGTGTT
GCGGTCATGGTTGTCCTTATGATTGCAGTAACTTGGAATGATATTATGCGTGCTTTCTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(204-272)

Peptidase family M50 (Peptidase_M50)

(6-406)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

100

100

1
  eeP Streptococcus thermophilus LMG 18311

99.762

100

0.998

Multiple sequence alignment