Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   CXM95_RS00190 Genome accession   NZ_CP025223
Coordinates   37964..39202 (+) Length   412 a.a.
NCBI ID   WP_005232893.1    Uniprot ID   A0A242CRN7
Organism   Enterococcus sp. CR-Ec1     
Function   facilitate localization of RecA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 32964..44202
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CXM95_RS00170 (CXM95_00170) - 33196..34464 (+) 1269 WP_005232897.1 pitrilysin family protein -
  CXM95_RS00175 (CXM95_00175) - 34457..35755 (+) 1299 WP_005232896.1 pitrilysin family protein -
  CXM95_RS00180 (CXM95_00180) - 36220..37122 (+) 903 WP_101698724.1 helix-turn-helix domain-containing protein -
  CXM95_RS00185 (CXM95_00185) pgsA 37255..37836 (+) 582 WP_042890631.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  CXM95_RS00190 (CXM95_00190) cinA 37964..39202 (+) 1239 WP_005232893.1 competence/damage-inducible protein A Machinery gene
  CXM95_RS00195 (CXM95_00195) recA 39305..40348 (+) 1044 WP_008376737.1 recombinase RecA Machinery gene
  CXM95_RS00200 (CXM95_00200) rny 40592..42166 (+) 1575 WP_005232891.1 ribonuclease Y -
  CXM95_RS00205 (CXM95_00205) treR 42469..43185 (-) 717 WP_005226457.1 trehalose operon repressor -
  CXM95_RS00210 (CXM95_00210) pgmB 43240..43890 (-) 651 WP_005232889.1 beta-phosphoglucomutase -

Sequence

Protein


Download         Length: 412 a.a.        Molecular weight: 44760.83 Da        Isoelectric Point: 4.5968

>NTDB_id=259101 CXM95_RS00190 WP_005232893.1 37964..39202(+) (cinA) [Enterococcus sp. CR-Ec1]
MKAEIIAVGTELLLGQVVNTNATFLSEELASLGIDVFYHSVVGDNPNRLEELLTIADKRSDLIVLCGGLGPTDDDLTKQV
TARHVGQELVRDEPGYHQLKAFFENSQRRMTENNLRQTLVFKDGVSLPNPNGLAIGIFYQTAATSYLLLPGPPSELQAMF
LTHAKPLLLEQFPQEEVLLSRVLRYYGIGESALVTELADLIENQVNPTIAPYAKPNEVTLRLTVKTADEAQGIKQLDALE
ETVQARVGAYFYGYGEQNSLAETVVDLLIEKKKTVTAAESLTAGLFQATLGGIPGVSEVFPGGFVTYSAGTKSKLLGIDS
ALLESYGTVSQECAEAMAVYARKQAETDYAVAFTGVAGPDELEGQPKGTVWIALASDKGVSSQLYHFNRDRAYIRHSAVM
AGLNQIRKELLN

Nucleotide


Download         Length: 1239 bp        

>NTDB_id=259101 CXM95_RS00190 WP_005232893.1 37964..39202(+) (cinA) [Enterococcus sp. CR-Ec1]
ATGAAAGCAGAAATTATTGCAGTCGGGACCGAATTACTTTTAGGACAGGTGGTGAATACGAACGCGACCTTCTTGTCAGA
AGAACTGGCAAGTCTAGGGATCGATGTTTTTTATCATAGTGTTGTCGGGGACAACCCCAATCGCTTAGAGGAATTGCTGA
CGATCGCCGACAAACGCAGCGACTTGATCGTGCTGTGCGGCGGCTTAGGGCCCACCGACGATGACTTGACGAAACAAGTC
ACTGCGCGCCATGTGGGACAGGAATTAGTGCGAGATGAACCAGGTTATCACCAATTGAAAGCCTTCTTTGAAAACAGTCA
ACGGAGGATGACGGAAAACAATTTGCGGCAGACCTTAGTCTTCAAAGACGGTGTGTCTTTGCCAAATCCCAATGGACTAG
CGATCGGGATTTTTTATCAGACAGCCGCTACCAGTTATTTGCTGCTGCCAGGACCGCCAAGTGAACTGCAGGCGATGTTT
CTTACCCACGCAAAACCACTTCTGTTAGAGCAGTTTCCCCAAGAAGAAGTCTTGCTTTCTCGCGTTTTGCGCTATTACGG
GATCGGGGAATCGGCGTTGGTCACAGAATTGGCCGATTTGATCGAGAACCAAGTCAATCCCACCATCGCCCCTTATGCCA
AACCCAATGAGGTCACATTGCGTCTGACGGTCAAAACCGCAGATGAGGCGCAAGGAATCAAACAATTGGATGCATTAGAA
GAAACCGTCCAAGCACGGGTCGGTGCGTATTTCTATGGATATGGGGAACAAAATTCGCTGGCAGAAACAGTCGTCGATCT
ACTAATCGAGAAAAAGAAAACCGTCACCGCAGCGGAAAGTTTGACCGCTGGTTTGTTTCAAGCGACCTTAGGAGGGATTC
CTGGCGTCTCTGAGGTGTTTCCCGGTGGGTTCGTGACATATTCTGCTGGAACAAAAAGCAAGCTCTTAGGCATCGATTCA
GCGCTTTTAGAAAGCTATGGGACTGTTAGTCAGGAGTGTGCGGAAGCAATGGCCGTCTATGCCCGCAAACAAGCAGAGAC
CGATTATGCGGTGGCCTTCACCGGTGTTGCTGGTCCAGACGAACTAGAAGGCCAGCCCAAAGGCACTGTTTGGATCGCCT
TAGCTTCTGACAAAGGCGTCTCAAGCCAGCTGTATCACTTCAACCGCGACCGCGCCTATATTCGGCATAGTGCTGTCATG
GCAGGCTTAAATCAAATACGTAAGGAATTATTAAATTAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(258-409)

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-168)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A242CRN7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Streptococcus pneumoniae TIGR4

50.355

100

0.517
  cinA Streptococcus mitis SK321

50.118

100

0.515
  cinA Streptococcus pneumoniae D39

50.118

100

0.515
  cinA Streptococcus pneumoniae Rx1

50.118

100

0.515
  cinA Streptococcus pneumoniae R6

50.118

100

0.515
  cinA Streptococcus mitis NCTC 12261

49.645

100

0.51
  cinA Streptococcus mutans UA159

50.24

100

0.507
  cinA Bacillus subtilis subsp. subtilis str. 168

44.988

99.272

0.447
  cinA Streptococcus suis isolate S10

42.754

100

0.43

Multiple sequence alignment