Detailed information NTG0254420

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: CTZ23_RS01455
• Genome accession: NZ_CP024620
• Coordinates: 299054..300112 (+)
• Length: 352 a.a.
• NCBI ID: WP_045795257.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain SGAir0564
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 294054..305112

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CTZ23_RS01440 (CTZ23_01435)	-	294057..294860 (+)	804	WP_104988079.1	putative RNA methyltransferase	-
CTZ23_RS01445 (CTZ23_01440)	-	294967..296271 (+)	1305	WP_104988080.1	IS4 family transposase	-
CTZ23_RS01450 (CTZ23_01445)	ponA	296312..298882 (-)	2571	WP_104988081.1	penicillin-binding protein PBP1a	-
CTZ23_RS01455 (CTZ23_01450)	pilM	299054..300112 (+)	1059	WP_045795257.1	pilus assembly protein PilM	Machinery gene
CTZ23_RS01460 (CTZ23_01455)	pilN	300112..300747 (+)	636	WP_005180516.1	PilN domain-containing protein	Machinery gene
CTZ23_RS01465 (CTZ23_01460)	pilO	300744..301463 (+)	720	WP_104988082.1	type 4a pilus biogenesis protein PilO	Machinery gene
CTZ23_RS01470 (CTZ23_01465)	pilP	301463..301990 (+)	528	WP_035363443.1	pilus assembly protein PilP	Machinery gene
CTZ23_RS01475 (CTZ23_01470)	pilQ	302051..304189 (+)	2139	WP_171456166.1	type IV pilus secretin PilQ	Machinery gene
CTZ23_RS01480 (CTZ23_01475)	aroK	304226..304768 (+)	543	WP_016658449.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38989.65 Da
• Isoelectric Point: 4.5587

>NTDB_id=254420 CTZ23_RS01455 WP_045795257.1 299054..300112(+) (pilM) [Acinetobacter indicus strain SGAir0564]
MRRLYRKPSKGLIGVDISSTSVKLLELSVKNDRYWVESYALVPLSEGSMVEKNILNPEAVGDALERAFNLANTPTTAAAL
AIPTSMVISKTIEMDADMTDDEREVQIRMDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRLENVESRCEAIEL
AGLTPKVADVESFAIENAFKVFADTLPMGVNTIGVLDIGHTMTTLSVLKDNKIIYTREQVFGGKQLTQEIQNRYGLSFEE
AGRAKKSRTLPDDYDVEVLEPFLEAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSSKIDIKRIESDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=254420 CTZ23_RS01455 WP_045795257.1 299054..300112(+) (pilM) [Acinetobacter indicus strain SGAir0564]
GTGCGCAGGTTATATCGTAAACCGAGTAAGGGGTTAATAGGTGTAGATATTAGTTCTACTTCTGTTAAGTTATTGGAGCT
CTCTGTAAAGAATGATCGTTACTGGGTGGAAAGTTACGCCTTGGTACCGCTCTCAGAGGGCAGTATGGTTGAGAAAAATA
TTCTGAATCCTGAAGCTGTAGGGGATGCGCTCGAGCGTGCCTTTAATTTGGCCAATACACCGACAACAGCTGCCGCTTTA
GCGATTCCAACCTCAATGGTAATTAGCAAGACCATTGAGATGGATGCCGATATGACGGATGACGAACGTGAAGTTCAGAT
TCGGATGGATGCAGAGCAATATATTCCTTTCCCATTAGATGAAGTTAGCCTAGACTTTGAGGTACTGCCTGATCGTCTGG
CTAATCCAAACCGGGTCAATGTCTTGCTAGTGGCGACACGACTGGAAAATGTCGAGAGTCGCTGTGAAGCGATTGAACTG
GCCGGTTTAACCCCAAAAGTGGCAGATGTTGAAAGCTTTGCCATTGAAAATGCCTTTAAAGTCTTCGCCGATACCTTGCC
GATGGGGGTAAATACCATTGGTGTGTTAGACATTGGTCATACCATGACCACGCTGTCGGTACTCAAAGACAATAAAATTA
TCTATACCCGCGAGCAGGTCTTTGGCGGCAAGCAGCTGACCCAGGAAATCCAGAACCGTTATGGTCTGTCTTTTGAAGAA
GCCGGCCGCGCCAAGAAAAGCCGTACCTTGCCAGATGATTACGATGTTGAAGTGCTGGAGCCATTCCTTGAAGCGGTGGT
GCAGCAGGCGGCACGTTCGCTGCAGTTCTTCTTCTCCTCATCGCAGTTTAATGAAATTGACCATATTCTGCTGGCCGGCG
GGAATGCCAATATTCCAGGCCTGGCCAAGCTGCTACAGCAAAAACTGGGTTACCGCGTCACCATTGCTAATCCGTTTTTA
CAGATGGGTTTCTCCTCCAAAATTGATATTAAAAGAATTGAAAGCGATGCCTCTTCATTGATGGTGGCATGTGGCTTGGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	83.807	100	0.838
comM	Acinetobacter nosocomialis M2	83.807	100	0.838
comM	Acinetobacter baylyi ADP1	78.409	100	0.784
pilM	Legionella pneumophila strain ERS1305867	41.62	100	0.423