Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | CTZ23_RS01470 | Genome accession | NZ_CP024620 |
| Coordinates | 301463..301990 (+) | Length | 175 a.a. |
| NCBI ID | WP_035363443.1 | Uniprot ID | - |
| Organism | Acinetobacter indicus strain SGAir0564 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 296463..306990
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CTZ23_RS01455 (CTZ23_01450) | pilM | 299054..300112 (+) | 1059 | WP_045795257.1 | pilus assembly protein PilM | Machinery gene |
| CTZ23_RS01460 (CTZ23_01455) | pilN | 300112..300747 (+) | 636 | WP_005180516.1 | PilN domain-containing protein | Machinery gene |
| CTZ23_RS01465 (CTZ23_01460) | pilO | 300744..301463 (+) | 720 | WP_104988082.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| CTZ23_RS01470 (CTZ23_01465) | pilP | 301463..301990 (+) | 528 | WP_035363443.1 | pilus assembly protein PilP | Machinery gene |
| CTZ23_RS01475 (CTZ23_01470) | pilQ | 302051..304189 (+) | 2139 | WP_171456166.1 | type IV pilus secretin PilQ | Machinery gene |
| CTZ23_RS01480 (CTZ23_01475) | aroK | 304226..304768 (+) | 543 | WP_016658449.1 | shikimate kinase AroK | - |
| CTZ23_RS01485 (CTZ23_01480) | aroB | 304791..305873 (+) | 1083 | WP_045795260.1 | 3-dehydroquinate synthase | - |
| CTZ23_RS01490 (CTZ23_01485) | - | 305886..306722 (+) | 837 | WP_104988084.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19257.41 Da Isoelectric Point: 7.1666
>NTDB_id=254423 CTZ23_RS01470 WP_035363443.1 301463..301990(+) (pilP) [Acinetobacter indicus strain SGAir0564]
MKFEKLSLVLVLGLLAAGCDSRIDAVNAQMAEIRNQPPLPIEPAPTFEPAPVFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNLSRQLQPLESYALETLSMKGSMRGQRGEIQALIQTPDGEIERIQRGSYMGLNHGRVINITPTQIDLIEIIPDGREG
YVERPRSLVLIGPAP
MKFEKLSLVLVLGLLAAGCDSRIDAVNAQMAEIRNQPPLPIEPAPTFEPAPVFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNLSRQLQPLESYALETLSMKGSMRGQRGEIQALIQTPDGEIERIQRGSYMGLNHGRVINITPTQIDLIEIIPDGREG
YVERPRSLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=254423 CTZ23_RS01470 WP_035363443.1 301463..301990(+) (pilP) [Acinetobacter indicus strain SGAir0564]
ATGAAATTTGAAAAACTTTCGTTGGTTCTGGTGTTGGGCCTACTGGCTGCAGGTTGTGATTCACGTATTGATGCCGTGAA
TGCACAAATGGCAGAAATCCGTAATCAGCCGCCGTTACCGATTGAACCGGCACCGACTTTTGAGCCAGCACCTGTATTTA
ACTATGCAGCACATCAGCTGAAAAGCCCGTTTATGCCAAGTTCTCTGGCGGCCGAGCTAAAGATTATGGCCGGCAAGCGG
GTTTATCCAAACCTGTCACGCCAGTTGCAGCCTTTAGAAAGCTATGCACTGGAAACCTTAAGCATGAAAGGCAGCATGCG
CGGGCAACGCGGTGAGATTCAGGCCCTGATTCAAACTCCAGATGGGGAAATTGAACGGATTCAGCGCGGCAGCTATATGG
GCTTGAATCATGGTCGGGTCATCAATATTACGCCGACACAAATTGACTTAATTGAGATTATTCCAGATGGTCGCGAAGGG
TATGTTGAACGTCCAAGAAGTCTAGTACTGATTGGGCCGGCGCCATAA
ATGAAATTTGAAAAACTTTCGTTGGTTCTGGTGTTGGGCCTACTGGCTGCAGGTTGTGATTCACGTATTGATGCCGTGAA
TGCACAAATGGCAGAAATCCGTAATCAGCCGCCGTTACCGATTGAACCGGCACCGACTTTTGAGCCAGCACCTGTATTTA
ACTATGCAGCACATCAGCTGAAAAGCCCGTTTATGCCAAGTTCTCTGGCGGCCGAGCTAAAGATTATGGCCGGCAAGCGG
GTTTATCCAAACCTGTCACGCCAGTTGCAGCCTTTAGAAAGCTATGCACTGGAAACCTTAAGCATGAAAGGCAGCATGCG
CGGGCAACGCGGTGAGATTCAGGCCCTGATTCAAACTCCAGATGGGGAAATTGAACGGATTCAGCGCGGCAGCTATATGG
GCTTGAATCATGGTCGGGTCATCAATATTACGCCGACACAAATTGACTTAATTGAGATTATTCCAGATGGTCGCGAAGGG
TATGTTGAACGTCCAAGAAGTCTAGTACTGATTGGGCCGGCGCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
74.857 |
100 |
0.749 |
| comL | Acinetobacter baylyi ADP1 |
71.856 |
95.429 |
0.686 |