Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | CTZ23_RS01460 | Genome accession | NZ_CP024620 |
| Coordinates | 300112..300747 (+) | Length | 211 a.a. |
| NCBI ID | WP_005180516.1 | Uniprot ID | N9MGL9 |
| Organism | Acinetobacter indicus strain SGAir0564 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 295112..305747
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CTZ23_RS01450 (CTZ23_01445) | ponA | 296312..298882 (-) | 2571 | WP_104988081.1 | penicillin-binding protein PBP1a | - |
| CTZ23_RS01455 (CTZ23_01450) | pilM | 299054..300112 (+) | 1059 | WP_045795257.1 | pilus assembly protein PilM | Machinery gene |
| CTZ23_RS01460 (CTZ23_01455) | pilN | 300112..300747 (+) | 636 | WP_005180516.1 | PilN domain-containing protein | Machinery gene |
| CTZ23_RS01465 (CTZ23_01460) | pilO | 300744..301463 (+) | 720 | WP_104988082.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| CTZ23_RS01470 (CTZ23_01465) | pilP | 301463..301990 (+) | 528 | WP_035363443.1 | pilus assembly protein PilP | Machinery gene |
| CTZ23_RS01475 (CTZ23_01470) | pilQ | 302051..304189 (+) | 2139 | WP_171456166.1 | type IV pilus secretin PilQ | Machinery gene |
| CTZ23_RS01480 (CTZ23_01475) | aroK | 304226..304768 (+) | 543 | WP_016658449.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 211 a.a. Molecular weight: 23494.92 Da Isoelectric Point: 7.9757
>NTDB_id=254421 CTZ23_RS01460 WP_005180516.1 300112..300747(+) (pilN) [Acinetobacter indicus strain SGAir0564]
MAKINLLPWRDELREKRKKEFIAVCIGAALIGVLAVTLAWFYYNHKLQDQEQANQLVISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQSQRPVAVRLVDELVRVTPSSMYLTKVARIGNKFTFEGKAESPNTVAEFLRNLEASPWYRNAFMNSFLA
VEENKNKAPSSVVPRVEESYGSFVVTADLDEIALPGTAPASGTQATAGAVQ
MAKINLLPWRDELREKRKKEFIAVCIGAALIGVLAVTLAWFYYNHKLQDQEQANQLVISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQSQRPVAVRLVDELVRVTPSSMYLTKVARIGNKFTFEGKAESPNTVAEFLRNLEASPWYRNAFMNSFLA
VEENKNKAPSSVVPRVEESYGSFVVTADLDEIALPGTAPASGTQATAGAVQ
Nucleotide
Download Length: 636 bp
>NTDB_id=254421 CTZ23_RS01460 WP_005180516.1 300112..300747(+) (pilN) [Acinetobacter indicus strain SGAir0564]
ATGGCAAAAATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAAAAACGAAAAAAAGAATTTATTGCGGTTTGTATTGG
GGCTGCATTAATTGGGGTGCTGGCCGTCACGCTGGCATGGTTCTATTACAACCATAAACTTCAAGATCAGGAACAGGCCA
ATCAGCTGGTGATCAGTACCAACCAGAATCTGGATGTACAGTTAAAGTCGCTGGAAGGCCTGCAAGAGCAGCGTAATGCC
ATTGTCGAGCGCATGAAGCTGATTCAGGGGCTGCAAAGTCAGCGTCCGGTGGCGGTACGTCTGGTCGATGAACTGGTACG
CGTCACCCCAAGTAGTATGTATTTGACCAAAGTGGCCCGTATTGGCAATAAATTTACCTTTGAAGGCAAGGCTGAAAGTC
CAAACACCGTGGCAGAGTTCCTGCGTAATCTGGAAGCATCGCCATGGTATCGCAATGCCTTCATGAATTCTTTCTTGGCC
GTTGAAGAAAATAAAAACAAGGCACCAAGTTCGGTTGTTCCACGGGTAGAAGAAAGCTATGGTAGCTTCGTGGTAACGGC
AGATTTGGATGAAATTGCACTTCCAGGCACAGCACCTGCGTCTGGTACTCAAGCAACAGCGGGGGCAGTACAATGA
ATGGCAAAAATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAAAAACGAAAAAAAGAATTTATTGCGGTTTGTATTGG
GGCTGCATTAATTGGGGTGCTGGCCGTCACGCTGGCATGGTTCTATTACAACCATAAACTTCAAGATCAGGAACAGGCCA
ATCAGCTGGTGATCAGTACCAACCAGAATCTGGATGTACAGTTAAAGTCGCTGGAAGGCCTGCAAGAGCAGCGTAATGCC
ATTGTCGAGCGCATGAAGCTGATTCAGGGGCTGCAAAGTCAGCGTCCGGTGGCGGTACGTCTGGTCGATGAACTGGTACG
CGTCACCCCAAGTAGTATGTATTTGACCAAAGTGGCCCGTATTGGCAATAAATTTACCTTTGAAGGCAAGGCTGAAAGTC
CAAACACCGTGGCAGAGTTCCTGCGTAATCTGGAAGCATCGCCATGGTATCGCAATGCCTTCATGAATTCTTTCTTGGCC
GTTGAAGAAAATAAAAACAAGGCACCAAGTTCGGTTGTTCCACGGGTAGAAGAAAGCTATGGTAGCTTCGTGGTAACGGC
AGATTTGGATGAAATTGCACTTCCAGGCACAGCACCTGCGTCTGGTACTCAAGCAACAGCGGGGGCAGTACAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
71.09 |
100 |
0.711 |
| comN | Acinetobacter baylyi ADP1 |
70.616 |
100 |
0.706 |