Detailed information NTG0254161

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: DLJ51_RS00905
• Genome accession: NZ_CP029560
• Coordinates: 155023..155457 (+)
• Length: 144 a.a.
• NCBI ID: WP_254051091.1
• Uniprot ID: -
• Organism: Streptococcus sobrinus strain NIDR 6715-7
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 150023..160457

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DLJ51_RS00885 (DLJ51_00885)	-	152038..152406 (+)	369	WP_019781971.1	DUF1033 family protein	-
DLJ51_RS00890 (DLJ51_00890)	comGA/cglA	152832..153779 (+)	948	WP_019777327.1	competence type IV pilus ATPase ComGA	Machinery gene
DLJ51_RS00895 (DLJ51_00895)	comGB	153703..154746 (+)	1044	WP_002959504.1	competence type IV pilus assembly protein ComGB	Machinery gene
DLJ51_RS00900 (DLJ51_00900)	comGC	154743..155069 (+)	327	WP_019770073.1	competence type IV pilus major pilin ComGC	Machinery gene
DLJ51_RS00905 (DLJ51_00905)	comGD	155023..155457 (+)	435	WP_254051091.1	competence type IV pilus minor pilin ComGD	Machinery gene
DLJ51_RS00910 (DLJ51_00910)	comGE	155429..155722 (+)	294	WP_002959510.1	competence type IV pilus minor pilin ComGE	Machinery gene
DLJ51_RS00915 (DLJ51_00915)	comGF	155706..156143 (+)	438	WP_019781940.1	competence type IV pilus minor pilin ComGF	Machinery gene
DLJ51_RS00920 (DLJ51_00920)	comGG	156121..156582 (+)	462	WP_019785527.1	competence type IV pilus minor pilin ComGG	Machinery gene
DLJ51_RS00930 (DLJ51_00930)	-	156784..157050 (+)	267	WP_002959516.1	type II toxin-antitoxin system RelE/ParE family toxin	-
DLJ51_RS00935 (DLJ51_00935)	-	157037..157312 (+)	276	WP_109982370.1	helix-turn-helix domain-containing protein	-
DLJ51_RS00940 (DLJ51_00940)	comGH	157411..158364 (+)	954	WP_019771347.1	class I SAM-dependent methyltransferase	Machinery gene
DLJ51_RS00945 (DLJ51_00945)	-	158427..159623 (+)	1197	WP_019771614.1	acetate kinase	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16126.34 Da
• Isoelectric Point: 9.6954

>NTDB_id=254161 DLJ51_RS00905 WP_254051091.1 155023..155457(+) (comGD) [Streptococcus sobrinus strain NIDR 6715-7]
MIITRNIRKVATFRTRAFTLIESLLVLAITSFLLLSFTGGVQQIFTGVQEKLFFLSFEHLYQDSQKLSNAQQKELTLRIA
DGQVTNGQESLSIPDSVRPNQTYSIEFSPAGGNSSLEKLTFTTKDGSVSYQLYIGSGRYKKTEN

Nucleotide

• Length: 435 bp

>NTDB_id=254161 DLJ51_RS00905 WP_254051091.1 155023..155457(+) (comGD) [Streptococcus sobrinus strain NIDR 6715-7]
ATGATTATTACAAGAAACATAAGGAAAGTCGCAACGTTCCGAACTAGAGCCTTTACTCTGATTGAAAGTCTCTTGGTCTT
GGCCATCACTAGCTTTTTACTCCTAAGCTTCACAGGCGGGGTCCAGCAAATTTTTACGGGCGTGCAGGAGAAACTCTTCT
TTCTCTCTTTTGAACACCTCTATCAGGACAGCCAGAAACTCAGTAATGCCCAGCAAAAGGAACTGACCTTGAGGATTGCT
GACGGCCAGGTGACCAATGGTCAGGAAAGTCTGAGTATCCCTGATTCTGTCAGGCCCAATCAGACCTACAGCATCGAATT
TTCACCAGCCGGTGGCAATTCTTCGCTGGAAAAATTGACCTTCACAACTAAGGATGGCTCTGTCTCTTATCAACTTTATA
TAGGAAGTGGTCGCTATAAAAAAACGGAAAATTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Streptococcus mutans UA140	58.333	91.667	0.535
comGD	Streptococcus mutans UA159	58.333	91.667	0.535
comGD	Streptococcus gordonii str. Challis substr. CH1	48.592	98.611	0.479
comGD/cglD	Streptococcus pneumoniae Rx1	45.669	88.194	0.403
comGD/cglD	Streptococcus pneumoniae R6	45.669	88.194	0.403
comGD/cglD	Streptococcus pneumoniae TIGR4	45.669	88.194	0.403
comGD/cglD	Streptococcus pneumoniae D39	45.669	88.194	0.403
comGD/cglD	Streptococcus mitis SK321	44.882	88.194	0.396
comGD/cglD	Streptococcus mitis NCTC 12261	42.424	91.667	0.389