Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   CO692_RS08245 Genome accession   NZ_CP023515
Coordinates   1496456..1497694 (+) Length   412 a.a.
NCBI ID   WP_005226441.1    Uniprot ID   A0A291DM14
Organism   Enterococcus sp. FDAARGOS_375     
Function   facilitate localization of RecA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1491456..1502694
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO692_RS08225 (CO692_08225) yfmF 1491688..1492956 (+) 1269 WP_096742008.1 EF-P 5-aminopentanol modification-associated protein YfmF -
  CO692_RS08230 (CO692_08230) yfmH 1492949..1494247 (+) 1299 WP_074934338.1 EF-P 5-aminopentanol modification-associated protein YfmH -
  CO692_RS08235 (CO692_08235) - 1494712..1495614 (+) 903 WP_016608952.1 helix-turn-helix domain-containing protein -
  CO692_RS08240 (CO692_08240) pgsA 1495747..1496328 (+) 582 WP_005226440.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  CO692_RS08245 (CO692_08245) cinA 1496456..1497694 (+) 1239 WP_005226441.1 competence/damage-inducible protein A Machinery gene
  CO692_RS08250 (CO692_08250) recA 1497797..1498840 (+) 1044 WP_005226448.1 recombinase RecA Machinery gene
  CO692_RS08255 (CO692_08255) rny 1499083..1500657 (+) 1575 WP_005232891.1 ribonuclease Y -
  CO692_RS08260 (CO692_08260) treR 1500960..1501676 (-) 717 WP_005226457.1 trehalose operon repressor -
  CO692_RS08265 (CO692_08265) pgmB 1501731..1502381 (-) 651 WP_005232889.1 beta-phosphoglucomutase -

Sequence

Protein


Download         Length: 412 a.a.        Molecular weight: 44827.92 Da        Isoelectric Point: 4.6520

>NTDB_id=248040 CO692_RS08245 WP_005226441.1 1496456..1497694(+) (cinA) [Enterococcus sp. FDAARGOS_375]
MKAEIIAVGTELLLGQVVNTNATFLSEELASLGIDVFYHSVVGDNPNRLEELLTIADKRSDLIVLCGGLGPTDDDLTKQV
TARHVGQELVRDEPGYHQLKAFFENSQRRMTENNLRQTLVFKDGVSLPNPNGLAIGIFYQTAATSYLLLPGPPSELQAMF
LTHAKPLLLEQFPQEEVLLSRVLRYYGIGESALVTELADLIENQVNPTIAPYAKPNEVTLRLTVKTADEAQGIKQLDALE
ETVQARVGAYFYGYGEQNSLAETVVERLIEKKKTVTAAESLTAGLFQATLGGIPGVSEVFPGGFVTYSAATKSKLLGIDP
GLLESYGTVSQECAEAMAVYARKQAETDYAVAFTGVAGPDELEGQPKGTVWIALASDKGVSSQLYHFNRDRAYIRHSAVM
AGLNQIRKELLN

Nucleotide


Download         Length: 1239 bp        

>NTDB_id=248040 CO692_RS08245 WP_005226441.1 1496456..1497694(+) (cinA) [Enterococcus sp. FDAARGOS_375]
ATGAAAGCAGAGATTATTGCAGTCGGGACCGAATTACTTTTAGGACAGGTGGTGAATACGAACGCAACCTTCTTGTCAGA
AGAACTGGCAAGTCTTGGGATCGATGTTTTTTATCATAGTGTTGTCGGGGACAACCCCAATCGCTTAGAAGAATTGCTGA
CGATCGCCGACAAACGCAGCGACTTGATCGTATTGTGCGGCGGCTTAGGGCCCACCGACGATGACTTGACGAAACAAGTC
ACTGCCCGTCATGTGGGACAAGAGTTAGTCAGAGATGAACCAGGCTATCACCAATTGAAAGCCTTCTTTGAAAACAGTCA
ACGGAGGATGACGGAAAACAATTTGCGGCAGACCCTCGTTTTTAAGGACGGTGTGTCTTTGCCAAATCCCAATGGACTAG
CGATCGGGATCTTTTATCAGACAGCCGCTACCAGTTATTTGCTGCTGCCAGGACCACCAAGTGAACTACAGGCGATGTTT
CTTACCCACGCAAAACCACTTCTGTTAGAGCAGTTTCCCCAAGAAGAGGTCTTGCTGTCTCGCGTTTTGCGCTATTACGG
GATCGGGGAATCGGCATTGGTCACAGAATTGGCCGATTTGATCGAGAATCAAGTCAATCCCACCATCGCTCCTTATGCCA
AACCCAATGAGGTCACGCTGCGTCTGACGGTCAAAACTGCAGACGAGGCGCAAGGGATCAAACAATTGGATGCGTTAGAA
GAAACCGTCCAAGCACGGGTCGGTGCGTATTTCTATGGGTATGGGGAACAAAATTCGCTGGCAGAAACAGTCGTCGAGCG
ACTGATCGAGAAAAAGAAAACCGTCACCGCAGCGGAAAGTTTGACCGCTGGTTTGTTCCAAGCGACCCTAGGAGGGATTC
CTGGCGTCTCTGAGGTGTTTCCCGGTGGGTTCGTGACATATTCTGCTGCAACAAAAAGCAAGCTCTTAGGCATCGATCCA
GGGCTTTTGGAAAGCTATGGAACTGTTAGTCAGGAATGTGCAGAAGCAATGGCCGTCTATGCCCGCAAACAAGCCGAGAC
TGATTATGCGGTGGCGTTTACGGGTGTTGCTGGTCCAGACGAGTTAGAAGGTCAGCCCAAAGGCACCGTTTGGATCGCCT
TAGCTTCTGACAAAGGCGTCTCGAGCCAGCTGTATCACTTCAACCGCGACCGCGCCTATATTCGGCATAGTGCCGTCATG
GCGGGCTTAAATCAAATACGTAAGGAATTATTAAATTAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(258-409)

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-168)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A291DM14

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Streptococcus pneumoniae TIGR4

50.591

100

0.519
  cinA Streptococcus mitis SK321

50.355

100

0.517
  cinA Streptococcus pneumoniae D39

50.355

100

0.517
  cinA Streptococcus pneumoniae Rx1

50.355

100

0.517
  cinA Streptococcus pneumoniae R6

50.355

100

0.517
  cinA Streptococcus mitis NCTC 12261

49.882

100

0.512
  cinA Streptococcus mutans UA159

49.76

100

0.502
  cinA Bacillus subtilis subsp. subtilis str. 168

44.988

99.272

0.447
  cinA Streptococcus suis isolate S10

43.237

100

0.434

Multiple sequence alignment