Detailed information NTG0247960

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: CO687_RS04180
• Genome accession: NZ_CP023511
• Coordinates: 840032..840469 (+)
• Length: 145 a.a.
• NCBI ID: WP_008810059.1
• Uniprot ID: -
• Organism: Streptococcus gordonii strain FDAARGOS_371
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 835032..845469

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CO687_RS04150 (CO687_04150)	-	836704..837063 (+)	360	WP_008810065.1	DUF1033 family protein	-
CO687_RS04155 (CO687_04155)	comYA	837176..838114 (+)	939	WP_046164736.1	competence type IV pilus ATPase ComGA	Machinery gene
CO687_RS04160 (CO687_04160)	comYB	838047..839081 (+)	1035	WP_061582647.1	competence type IV pilus assembly protein ComGB	Machinery gene
CO687_RS04165 (CO687_04165)	comYC	839078..839395 (+)	318	WP_045634162.1	competence type IV pilus major pilin ComGC	Machinery gene
CO687_RS04170 (CO687_04170)	comYD	839355..839783 (+)	429	WP_096754961.1	competence type IV pilus minor pilin ComGD	Machinery gene
CO687_RS04175 (CO687_04175)	comGE/cglE	839755..840048 (+)	294	WP_096754962.1	competence type IV pilus minor pilin ComGE	Machinery gene
CO687_RS04180 (CO687_04180)	comGF/cglF	840032..840469 (+)	438	WP_008810059.1	competence type IV pilus minor pilin ComGF	Machinery gene
CO687_RS04185 (CO687_04185)	comGG	840450..840881 (+)	432	WP_172858951.1	competence type IV pilus minor pilin ComGG	-
CO687_RS04190 (CO687_04190)	comYH	840912..841865 (+)	954	WP_096754963.1	class I SAM-dependent methyltransferase	Machinery gene
CO687_RS04195 (CO687_04195)	-	841915..843105 (+)	1191	WP_048777262.1	acetate kinase	-
CO687_RS04200 (CO687_04200)	-	843153..843818 (+)	666	WP_048777261.1	type II CAAX endopeptidase family protein	-
CO687_RS04205 (CO687_04205)	folP	843896..844861 (+)	966	WP_061596807.1	dihydropteroate synthase	-

Sequence

Protein

• Length: 145 a.a.
• Molecular weight: 16578.11 Da
• Isoelectric Point: 6.8838

>NTDB_id=247960 CO687_RS04180 WP_008810059.1 840032..840469(+) (comGF/cglF) [Streptococcus gordonii strain FDAARGOS_371]
MLKKGKVGAFTLLEALVALLVISGGLLVFQAMTKLLASEIQYQEQTKAKEWLLFADQLDVELSRSHFEKVEQNKLYVKQD
GKSIAFGKSKSDDFRKTDANGRGYQPMIYGLEAAQIHKEGQIVHLLLQFKDGLEREYIYRVEEEH

Nucleotide

• Length: 438 bp

>NTDB_id=247960 CO687_RS04180 WP_008810059.1 840032..840469(+) (comGF/cglF) [Streptococcus gordonii strain FDAARGOS_371]
ATGTTGAAAAAAGGTAAAGTAGGAGCTTTTACCTTGCTGGAAGCCTTAGTAGCCCTCTTGGTCATCAGTGGTGGCCTCTT
GGTTTTTCAAGCTATGACTAAGCTTCTAGCCAGCGAAATTCAGTATCAAGAGCAGACTAAGGCTAAGGAATGGCTCTTGT
TTGCGGACCAGCTAGATGTAGAACTATCTCGTAGCCATTTTGAAAAGGTTGAGCAAAACAAGCTTTATGTTAAACAAGAT
GGTAAGTCGATTGCCTTTGGTAAGTCTAAAAGCGATGATTTTCGAAAGACGGATGCGAATGGCCGTGGTTATCAACCCAT
GATTTATGGCTTAGAAGCTGCTCAAATACATAAAGAAGGTCAGATAGTTCATTTGCTTTTGCAGTTTAAGGACGGCCTAG
AAAGAGAGTACATCTATCGTGTTGAAGAAGAACATTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (38-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	68.31	97.931	0.669
comGF/cglF	Streptococcus pneumoniae D39	68.31	97.931	0.669
comGF/cglF	Streptococcus pneumoniae R6	68.31	97.931	0.669
comGF/cglF	Streptococcus pneumoniae TIGR4	68.31	97.931	0.669
comGF/cglF	Streptococcus mitis NCTC 12261	67.376	97.241	0.655
comGF/cglF	Streptococcus mitis SK321	65.957	97.241	0.641
comYF	Streptococcus mutans UA140	47.887	97.931	0.469
comYF	Streptococcus mutans UA159	47.183	97.931	0.462
comGF	Lactococcus lactis subsp. cremoris KW2	42.857	96.552	0.414