Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C7M30_RS16445 Genome accession   NZ_CP028218
Coordinates   3192708..3193403 (+) Length   231 a.a.
NCBI ID   WP_070547660.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102756     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3187708..3198403
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M30_RS16420 (C7M30_03261) ytrB 3187736..3188614 (+) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -
  C7M30_RS16425 (C7M30_03262) ytrC 3188608..3189594 (+) 987 WP_160244704.1 ABC transporter permease YtrC -
  C7M30_RS16430 (C7M30_03263) - 3189624..3190601 (+) 978 WP_133954490.1 ABC transporter permease -
  C7M30_RS16435 (C7M30_03264) ytrE 3190616..3191311 (+) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  C7M30_RS16440 (C7M30_03265) ytrF 3191301..3192611 (+) 1311 WP_015251399.1 ABC transporter permease YtrF -
  C7M30_RS16445 (C7M30_03266) braR 3192708..3193403 (+) 696 WP_070547660.1 two-component response regulator BceR Regulator
  C7M30_RS16450 (C7M30_03267) bceS 3193396..3194400 (+) 1005 WP_160244705.1 two-component sensor histidine kinase BceS -
  C7M30_RS16455 (C7M30_03268) bceA 3194502..3195263 (+) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  C7M30_RS16460 (C7M30_03269) bceB 3195253..3197193 (+) 1941 WP_160244706.1 bacitracin ABC transporter permease BceB -
  C7M30_RS16465 (C7M30_03270) yttA 3197230..3197976 (-) 747 WP_048655239.1 LMBR1 domain-containing protein -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26909.77 Da        Isoelectric Point: 5.3731

>NTDB_id=240552 C7M30_RS16445 WP_070547660.1 3192708..3193403(+) (braR) [Bacillus subtilis strain SRCM102756]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRQIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDVLQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=240552 C7M30_RS16445 WP_070547660.1 3192708..3193403(+) (braR) [Bacillus subtilis strain SRCM102756]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCAGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCA
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGTGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGTCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377

Multiple sequence alignment