Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   CG712_RS02005 Genome accession   NZ_CP022547
Coordinates   380437..381249 (-) Length   270 a.a.
NCBI ID   WP_011681204.1    Uniprot ID   A0AAP2RND8
Organism   Streptococcus thermophilus strain B59671     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 375437..386249
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CG712_RS01980 (CG712_02005) - 376374..376760 (-) 387 WP_002953113.1 DUF1934 domain-containing protein -
  CG712_RS01985 (CG712_02010) - 376852..377731 (-) 880 Protein_385 GNAT family N-acetyltransferase -
  CG712_RS01990 (CG712_02015) yidA 377939..378748 (+) 810 WP_011226081.1 sugar-phosphatase -
  CG712_RS01995 (CG712_02020) - 378750..379964 (+) 1215 WP_096811491.1 aminoacyltransferase -
  CG712_RS02000 (CG712_02025) - 380016..380377 (-) 362 Protein_388 YbaN family protein -
  CG712_RS02005 (CG712_02030) vicX 380437..381249 (-) 813 WP_011681204.1 MBL fold metallo-hydrolase Regulator
  CG712_RS02010 (CG712_02035) vicK 381227..382597 (-) 1371 WP_096811492.1 cell wall metabolism sensor histidine kinase VicK Regulator
  CG712_RS02015 (CG712_02040) vicR 382590..383297 (-) 708 WP_011226084.1 response regulator YycF Regulator
  CG712_RS02020 (CG712_02045) - 383824..384591 (+) 768 WP_011226085.1 amino acid ABC transporter ATP-binding protein -
  CG712_RS02025 (CG712_02050) - 384603..385436 (+) 834 WP_002953142.1 transporter substrate-binding domain-containing protein -
  CG712_RS02030 (CG712_02055) - 385454..386152 (+) 699 WP_022096755.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30045.01 Da        Isoelectric Point: 5.5779

>NTDB_id=240550 CG712_RS02005 WP_011681204.1 380437..381249(-) (vicX) [Streptococcus thermophilus strain B59671]
MTSELGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKVDNSQKHIFSRGKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GLIENADGYLIESNHDIEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAYMTME
NQLARADFGVGTDFKIFGTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=240550 CG712_RS02005 WP_011681204.1 380437..381249(-) (vicX) [Streptococcus thermophilus strain B59671]
ATGACCTCAGAATTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACCGGGAATTCCTTTTATTTGGAAACTCCAGA
AAAGAAGATTCTAGTGGATGCTGGTTTATCAGGAAAAAAAATTACAAGTTTGCTAGCGGAGATTGACCGTGATCCAAGTG
ATCTTGATGCTATCTTAGTAACACATGAACACAAGGACCATATCCATGGTGTAGGTGTTTTAGCTCGTAAATACGGCATG
GATATATACGCCAATGAGAAAACCTGGCAAATTATGGATAGTAAGAATATGCTAGGTAAGGTTGATAATAGTCAGAAACA
TATTTTTTCTCGCGGTAAGCTTCTAACCTTTGGTGATATCGACATTGAATCTTTCGGAGTTAGTCATGATGCCATTGATC
CACAATTTTACCGCTTTATGAAAGACGGAAAGAGCTTTGTCATGTTGACGGATACAGGCTATGTTTCAGACCGTATGGCT
GGTCTTATTGAAAATGCTGATGGCTATCTGATTGAATCTAATCATGATATTGAAATCTTGAGAGCTGGTTCTTATCCTTG
GTCAACCAAGCAACGTATCCTCTCTGATCAGGGTCACTTATGTAATGAGGATGGAGCCGATGCTATGATTCGTACCATCG
GTAATAAAACTAAAAAGATTTATCTGGGTCACCTTTCTAAAGAAAATAATATCAAGGAATTGGCCTACATGACGATGGAA
AATCAGTTGGCTCGCGCTGACTTTGGTGTTGGAACTGACTTTAAGATTTTTGGTACCTCACCAGATACGGCGACCCCACT
AACAGATATTTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.985

99.259

0.774

Multiple sequence alignment