Detailed information NTG0240553

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: CG712_RS02040
• Genome accession: NZ_CP022547
• Coordinates: 386886..387767 (-)
• Length: 293 a.a.
• NCBI ID: WP_022096754.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain B59671
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 381886..392767

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CG712_RS02015 (CG712_02040)	vicR	382590..383297 (-)	708	WP_011226084.1	response regulator YycF	Regulator
CG712_RS02020 (CG712_02045)	-	383824..384591 (+)	768	WP_011226085.1	amino acid ABC transporter ATP-binding protein	-
CG712_RS02025 (CG712_02050)	-	384603..385436 (+)	834	WP_002953142.1	transporter substrate-binding domain-containing protein	-
CG712_RS02030 (CG712_02055)	-	385454..386152 (+)	699	WP_022096755.1	amino acid ABC transporter permease	-
CG712_RS02035 (CG712_02060)	-	386164..386814 (+)	651	WP_011226088.1	amino acid ABC transporter permease	-
CG712_RS02040 (CG712_02065)	endA	386886..387767 (-)	882	WP_022096754.1	DNA/RNA non-specific endonuclease	Machinery gene
CG712_RS02045 (CG712_02070)	-	387829..388017 (-)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
CG712_RS02050 (CG712_02075)	murA	388019..389290 (-)	1272	WP_096811493.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
CG712_RS02055 (CG712_02080)	-	389360..389596 (-)	237	WP_002946959.1	DUF1146 family protein	-
CG712_RS02060 (CG712_02085)	galE	389784..390797 (-)	1014	WP_096811494.1	UDP-glucose 4-epimerase GalE	-
CG712_RS02065 (CG712_02090)	-	390757..391245 (-)	489	WP_232510037.1	DUF4832 domain-containing protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31813.61 Da
• Isoelectric Point: 10.1789

>NTDB_id=240553 CG712_RS02040 WP_022096754.1 386886..387767(-) (endA) [Streptococcus thermophilus strain B59671]
MAKRKTSLTNKQKRQLVTLIIAVLIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSINSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=240553 CG712_RS02040 WP_022096754.1 386886..387767(-) (endA) [Streptococcus thermophilus strain B59671]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGTTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAATAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTGGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	70.635	86.007	0.608
endA	Streptococcus pneumoniae D39	70.635	86.007	0.608
endA	Streptococcus pneumoniae R6	70.635	86.007	0.608
endA	Streptococcus pneumoniae TIGR4	70.635	86.007	0.608