Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | CHH28_RS18340 | Genome accession | NZ_CP022530 |
| Coordinates | 3995373..3995645 (+) | Length | 90 a.a. |
| NCBI ID | WP_094061671.1 | Uniprot ID | A0A222FP07 |
| Organism | Bacterioplanes sanyensis strain NV9 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3990373..4000645
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CHH28_RS18325 (CHH28_18335) | - | 3990668..3991534 (-) | 867 | WP_094061668.1 | 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase | - |
| CHH28_RS18330 (CHH28_18340) | - | 3991538..3992317 (-) | 780 | WP_094061669.1 | hypothetical protein | - |
| CHH28_RS18335 (CHH28_18345) | topA | 3992625..3995279 (+) | 2655 | WP_094061670.1 | type I DNA topoisomerase | - |
| CHH28_RS18340 (CHH28_18350) | comEA | 3995373..3995645 (+) | 273 | WP_094061671.1 | ComEA family DNA-binding protein | Machinery gene |
| CHH28_RS18345 (CHH28_18355) | - | 3995659..3995919 (-) | 261 | WP_094061672.1 | glutaredoxin family protein | - |
| CHH28_RS18350 (CHH28_18360) | - | 3995952..3996995 (-) | 1044 | WP_094061673.1 | DUF5610 domain-containing protein | - |
| CHH28_RS18355 (CHH28_18365) | - | 3997095..3997376 (-) | 282 | WP_094061674.1 | hypothetical protein | - |
| CHH28_RS18360 (CHH28_18370) | - | 3997463..3998506 (-) | 1044 | WP_269843673.1 | AraC family transcriptional regulator | - |
| CHH28_RS18365 (CHH28_18375) | - | 3998662..3999522 (+) | 861 | WP_094061675.1 | MaoC family dehydratase | - |
| CHH28_RS18370 (CHH28_18380) | - | 3999638..4000330 (+) | 693 | WP_094061676.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 90 a.a. Molecular weight: 9610.03 Da Isoelectric Point: 9.0189
>NTDB_id=240375 CHH28_RS18340 WP_094061671.1 3995373..3995645(+) (comEA) [Bacterioplanes sanyensis strain NV9]
MQWIKTAILALLVCSAAAYANPEKTEQLININTASVEQLSALKGIGASKAQAIVAYREHHGKFATTDDLTKVKGIGNATL
QSNRAQLTVE
MQWIKTAILALLVCSAAAYANPEKTEQLININTASVEQLSALKGIGASKAQAIVAYREHHGKFATTDDLTKVKGIGNATL
QSNRAQLTVE
Nucleotide
Download Length: 273 bp
>NTDB_id=240375 CHH28_RS18340 WP_094061671.1 3995373..3995645(+) (comEA) [Bacterioplanes sanyensis strain NV9]
ATGCAATGGATTAAAACTGCAATTCTCGCTCTATTGGTTTGCTCAGCGGCGGCTTACGCCAATCCAGAGAAGACCGAACA
GCTCATTAATATCAACACCGCCAGCGTCGAGCAGCTCAGTGCATTAAAAGGCATTGGTGCGAGCAAAGCCCAAGCGATTG
TGGCCTATCGCGAACACCACGGGAAGTTCGCCACCACCGACGACCTAACCAAAGTAAAAGGTATTGGTAACGCGACGTTG
CAATCCAATCGAGCGCAGTTAACGGTCGAATAA
ATGCAATGGATTAAAACTGCAATTCTCGCTCTATTGGTTTGCTCAGCGGCGGCTTACGCCAATCCAGAGAAGACCGAACA
GCTCATTAATATCAACACCGCCAGCGTCGAGCAGCTCAGTGCATTAAAAGGCATTGGTGCGAGCAAAGCCCAAGCGATTG
TGGCCTATCGCGAACACCACGGGAAGTTCGCCACCACCGACGACCTAACCAAAGTAAAAGGTATTGGTAACGCGACGTTG
CAATCCAATCGAGCGCAGTTAACGGTCGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
47.368 |
100 |
0.5 |
| comEA | Vibrio cholerae strain A1552 |
47.368 |
100 |
0.5 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
47.826 |
100 |
0.489 |
| comEA | Vibrio campbellii strain DS40M4 |
41.053 |
100 |
0.433 |
| comEA | Legionella pneumophila str. Paris |
41.111 |
100 |
0.411 |
| comEA | Legionella pneumophila strain ERS1305867 |
41.111 |
100 |
0.411 |
| comEA | Acinetobacter baylyi ADP1 |
43.373 |
92.222 |
0.4 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
43.038 |
87.778 |
0.378 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
53.125 |
71.111 |
0.378 |