Detailed information
Bioinformatically predicted
Overview
| Name | ylbF | Type | Regulator |
| Locus tag | TRNA_RS30010 | Genome accession | NC_006270 |
| Coordinates | 1672934..1673383 (+) | Length | 149 a.a. |
| NCBI ID | WP_003181503.1 | Uniprot ID | Q65K02 |
| Organism | Bacillus licheniformis DSM 13 = ATCC 14580 | ||
| Function | accelerate the production of Spo0A~P (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1667934..1678383
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TRNA_RS29975 (BL02983) | ctaF | 1668377..1668706 (+) | 330 | WP_003181487.1 | cytochrome c oxidase subunit IVB | - |
| TRNA_RS29980 (BL02984) | ctaG | 1668740..1669639 (+) | 900 | WP_011197954.1 | cytochrome c oxidase assembly factor CtaG | - |
| TRNA_RS29985 (BL03000) | - | 1669696..1670055 (-) | 360 | WP_003181492.1 | YugN family protein | - |
| TRNA_RS29990 (BL02985) | - | 1670223..1670669 (+) | 447 | WP_003181494.1 | CBS domain-containing protein | - |
| TRNA_RS29995 (BL02986) | - | 1670810..1671853 (+) | 1044 | WP_003181497.1 | CAP domain-containing protein | - |
| TRNA_RS30000 (BL02987) | - | 1672007..1672402 (+) | 396 | WP_003181499.1 | YlbD family protein | - |
| TRNA_RS30005 (BL02988) | - | 1672417..1672656 (+) | 240 | WP_003181501.1 | YlbE-like family protein | - |
| TRNA_RS30010 (BL05154) | ylbF | 1672934..1673383 (+) | 450 | WP_003181503.1 | YlbF family regulator | Regulator |
| TRNA_RS30015 (BL02989) | - | 1673455..1673727 (+) | 273 | WP_009328559.1 | YlbG family protein | - |
| TRNA_RS44275 | - | 1673837..1673971 (+) | 135 | WP_254926361.1 | hypothetical protein | - |
| TRNA_RS30020 (BL02990) | rsmD | 1674020..1674586 (+) | 567 | WP_003181507.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| TRNA_RS30025 (BL02991) | coaD | 1674579..1675073 (+) | 495 | WP_003181508.1 | pantetheine-phosphate adenylyltransferase | - |
| TRNA_RS30030 (BL03001) | ylbJ | 1675082..1676302 (-) | 1221 | WP_003181511.1 | sporulation integral membrane protein YlbJ | - |
| TRNA_RS30035 (BL02992) | - | 1676626..1677648 (+) | 1023 | WP_009328558.1 | SepM family pheromone-processing serine protease | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16903.11 Da Isoelectric Point: 6.3347
>NTDB_id=23892 TRNA_RS30010 WP_003181503.1 1672934..1673383(+) (ylbF) [Bacillus licheniformis DSM 13 = ATCC 14580]
MFATMESLRLQNEAYDLANMILQSEAAEHYRKCYKRLREDEEAGRIIASFTKIKEQYEDVQRFGKYHPDYKEISKKMREI
KRELDLHDTVAEFKKAETELQSILDEVSVEIGHAVSKHIKVPTGNPYFDNLSSCGGGCGSGGSCGCKVS
MFATMESLRLQNEAYDLANMILQSEAAEHYRKCYKRLREDEEAGRIIASFTKIKEQYEDVQRFGKYHPDYKEISKKMREI
KRELDLHDTVAEFKKAETELQSILDEVSVEIGHAVSKHIKVPTGNPYFDNLSSCGGGCGSGGSCGCKVS
Nucleotide
Download Length: 450 bp
>NTDB_id=23892 TRNA_RS30010 WP_003181503.1 1672934..1673383(+) (ylbF) [Bacillus licheniformis DSM 13 = ATCC 14580]
ATGTTTGCCACAATGGAATCGTTGCGGCTTCAAAATGAAGCATATGATTTGGCCAACATGATTCTTCAATCAGAGGCGGC
TGAACATTACAGAAAATGCTACAAGCGTCTCCGCGAAGATGAAGAGGCCGGACGTATTATCGCTTCGTTTACGAAAATAA
AAGAACAGTACGAGGATGTGCAGCGCTTTGGCAAGTATCATCCTGATTATAAAGAGATATCCAAGAAAATGAGGGAAATC
AAACGGGAGCTTGACCTTCACGATACAGTAGCCGAATTTAAAAAGGCGGAAACCGAGCTGCAATCCATTCTTGATGAAGT
CAGCGTGGAAATCGGTCATGCTGTGTCAAAACATATCAAAGTACCGACTGGAAACCCTTATTTTGATAATCTTTCATCTT
GCGGCGGCGGCTGCGGGTCAGGCGGAAGCTGCGGCTGTAAAGTTTCCTGA
ATGTTTGCCACAATGGAATCGTTGCGGCTTCAAAATGAAGCATATGATTTGGCCAACATGATTCTTCAATCAGAGGCGGC
TGAACATTACAGAAAATGCTACAAGCGTCTCCGCGAAGATGAAGAGGCCGGACGTATTATCGCTTCGTTTACGAAAATAA
AAGAACAGTACGAGGATGTGCAGCGCTTTGGCAAGTATCATCCTGATTATAAAGAGATATCCAAGAAAATGAGGGAAATC
AAACGGGAGCTTGACCTTCACGATACAGTAGCCGAATTTAAAAAGGCGGAAACCGAGCTGCAATCCATTCTTGATGAAGT
CAGCGTGGAAATCGGTCATGCTGTGTCAAAACATATCAAAGTACCGACTGGAAACCCTTATTTTGATAATCTTTCATCTT
GCGGCGGCGGCTGCGGGTCAGGCGGAAGCTGCGGCTGTAAAGTTTCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ylbF | Bacillus subtilis subsp. subtilis str. 168 |
84.564 |
100 |
0.846 |