Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   BCE33L_RS18905 Genome accession   NC_006274
Coordinates   3672323..3673561 (-) Length   412 a.a.
NCBI ID   WP_000990709.1    Uniprot ID   Q636P5
Organism   Bacillus cereus E33L     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 3667323..3678561
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BCE33L_RS18880 (BCE33L3535) spoVS 3667407..3667667 (-) 261 WP_000404341.1 stage V sporulation protein SpoVS -
  BCE33L_RS18885 (BCE33L3536) - 3667816..3668610 (-) 795 WP_001221095.1 TIGR00282 family metallophosphoesterase -
  BCE33L_RS18890 (BCE33L3537) rny 3668776..3670338 (-) 1563 WP_000099773.1 ribonuclease Y -
  BCE33L_RS18895 (BCE33L3538) - 3670820..3671242 (-) 423 Protein_3663 DNA recombination/repair protein RecA -
  BCE33L_RS18900 (BCE33L3539) recA 3671570..3672178 (-) 609 Protein_3664 recombinase RecA -
  BCE33L_RS18905 (BCE33L3540) cinA 3672323..3673561 (-) 1239 WP_000990709.1 competence/damage-inducible protein CinA Machinery gene
  BCE33L_RS18910 (BCE33L3541) pgsA 3673582..3674160 (-) 579 WP_001052964.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  BCE33L_RS18915 (BCE33L3542) - 3674224..3675135 (-) 912 WP_000137485.1 helix-turn-helix domain-containing protein -
  BCE33L_RS18920 (BCE33L3543) - 3675157..3675942 (-) 786 WP_000574107.1 DUF3388 domain-containing protein -
  BCE33L_RS18925 (BCE33L3544) - 3676082..3676330 (-) 249 WP_000114454.1 DUF3243 domain-containing protein -
  BCE33L_RS18930 (BCE33L3545) ymfI 3676406..3677119 (-) 714 WP_000759610.1 elongation factor P 5-aminopentanone reductase -
  BCE33L_RS18935 (BCE33L3546) yfmH 3677223..3678509 (-) 1287 WP_000411946.1 EF-P 5-aminopentanol modification-associated protein YfmH -

Sequence

Protein


Download         Length: 412 a.a.        Molecular weight: 45368.62 Da        Isoelectric Point: 5.0308

>NTDB_id=23635 BCE33L_RS18905 WP_000990709.1 3672323..3673561(-) (cinA) [Bacillus cereus E33L]
MNAEIIAVGTELLLGQIANTNAQFLSEKLASIGINVYYHTVVGDNNKRLQQAIEVAEERADMLIFTGGLGPTKDDLTKET
IASSLAEELVYDEKALASIGDYFKRTGREFTENNKKQALVLDGATVFANDHGMAPGMGLNKNGKVYILLPGPPKEMKPMY
VSYVEPFLRNFTTGENIYSRVLRFFGIGESQLEVKVQDLIDGQTNPTIAPLANDGEVTLRLTAKHQNVDEAEKLIQHVED
LILERVGEFFYGYDQEFLHYKAIELLKKKGLTLACAESLTGGLFGNQVTESAGVSSVFKGGVICYHNDVKQHVLHVPEEV
LSTDGAVSKECARYLAENVKELLKADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIRERSAKY
GFYHLYKKLEEI

Nucleotide


Download         Length: 1239 bp        

>NTDB_id=23635 BCE33L_RS18905 WP_000990709.1 3672323..3673561(-) (cinA) [Bacillus cereus E33L]
ATGAATGCTGAAATCATTGCGGTTGGAACAGAATTATTACTTGGACAAATTGCAAATACGAACGCCCAGTTTTTGTCTGA
AAAGTTAGCTTCAATTGGAATTAACGTGTACTACCATACTGTAGTTGGTGATAATAACAAGCGACTGCAGCAGGCGATTG
AAGTTGCAGAGGAACGTGCGGATATGCTCATTTTCACAGGTGGATTAGGACCGACGAAAGATGATTTAACGAAGGAAACA
ATAGCGTCTAGCTTAGCGGAAGAGCTTGTATATGATGAAAAGGCATTAGCATCAATAGGCGATTACTTTAAGCGAACAGG
TCGAGAGTTCACGGAGAATAATAAAAAGCAGGCGCTCGTTTTGGATGGAGCAACTGTATTTGCAAATGATCACGGTATGG
CACCTGGTATGGGATTAAATAAGAACGGAAAAGTTTATATTTTATTACCAGGACCACCGAAAGAAATGAAGCCGATGTAT
GTAAGTTATGTGGAGCCTTTTTTACGTAACTTTACAACAGGAGAAAACATTTATTCTCGTGTGCTTCGCTTTTTCGGAAT
TGGGGAATCTCAATTAGAGGTAAAAGTTCAAGATTTAATTGATGGACAAACGAATCCGACAATTGCCCCGCTTGCGAATG
ATGGAGAAGTGACATTACGTTTAACTGCTAAACATCAAAATGTTGATGAAGCAGAGAAACTCATTCAGCATGTGGAAGAT
TTGATTTTAGAAAGAGTAGGAGAATTTTTCTACGGGTATGACCAAGAGTTTCTGCATTATAAGGCGATAGAGTTATTGAA
GAAAAAAGGATTAACTTTAGCGTGTGCGGAAAGTTTAACAGGTGGTCTCTTCGGTAATCAAGTAACAGAAAGTGCTGGTG
TGTCTTCCGTATTTAAGGGCGGTGTCATTTGTTATCATAATGATGTGAAGCAACATGTTTTACATGTACCTGAGGAAGTG
TTGTCTACTGACGGTGCAGTTAGTAAAGAATGTGCCCGTTATCTTGCTGAAAATGTTAAAGAATTATTAAAAGCGGATAT
CGGGATTAGTTTCACTGGGGTAGCAGGACCGGATGCTTCAGAACATAAAGAACCGGGAACAGTATTTGTTGGATTGGCGA
TTAAAGATGAACCAACTGTAGTCTTTCCTCTTAATTTAAGTGGAAGTCGCCAACAAATTAGAGAACGCTCAGCGAAATAT
GGATTTTATCATTTATATAAAAAGCTAGAAGAAATATAA

Domains

Predicted by InterproScan.

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)

Damage-inducible protein CinA KH domain (CinA_KH)

(179-252)

Competence-damaged protein (CinA)

(258-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q636P5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

58.981

100

0.59
  cinA Streptococcus mitis SK321

47.255

100

0.481
  cinA Streptococcus pneumoniae TIGR4

47.017

100

0.478
  cinA Streptococcus pneumoniae Rx1

46.539

100

0.473
  cinA Streptococcus pneumoniae R6

46.539

100

0.473
  cinA Streptococcus pneumoniae D39

46.301

100

0.471
  cinA Streptococcus mitis NCTC 12261

46.301

100

0.471
  cinA Streptococcus mutans UA159

45.567

98.544

0.449
  cinA Streptococcus suis isolate S10

41.27

91.748

0.379

Multiple sequence alignment