Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | BJE04_RS05610 | Genome accession | NC_005139 |
| Coordinates | 1117577..1117879 (+) | Length | 100 a.a. |
| NCBI ID | WP_011149846.1 | Uniprot ID | Q7MMG2 |
| Organism | Vibrio vulnificus YJ016 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1112577..1122879
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJE04_RS05595 (VV1106) | lon | 1112591..1114942 (+) | 2352 | WP_011078147.1 | endopeptidase La | - |
| BJE04_RS05600 (VV1107) | - | 1115136..1115408 (+) | 273 | WP_013572181.1 | HU family DNA-binding protein | - |
| BJE04_RS05605 (VV1108) | ppiD | 1115585..1117444 (+) | 1860 | WP_043877103.1 | peptidylprolyl isomerase | - |
| BJE04_RS05610 (VV1109) | comEA | 1117577..1117879 (+) | 303 | WP_011149846.1 | ComEA family DNA-binding protein | Machinery gene |
| BJE04_RS05615 (VV1111) | rrtA | 1117926..1118510 (-) | 585 | WP_011078143.1 | rhombosortase | - |
| BJE04_RS05620 (VV1110) | - | 1118490..1119098 (+) | 609 | WP_011149847.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| BJE04_RS05625 (VV1112) | - | 1119120..1120451 (-) | 1332 | WP_011078141.1 | anti-phage deoxyguanosine triphosphatase | - |
| BJE04_RS05630 (VV1113) | yfbR | 1120457..1121041 (-) | 585 | WP_013572175.1 | 5'-deoxynucleotidase | - |
| BJE04_RS05635 (VV1114) | - | 1121122..1122336 (-) | 1215 | WP_011080966.1 | pyridoxal phosphate-dependent aminotransferase | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 10886.70 Da Isoelectric Point: 9.6573
>NTDB_id=23129 BJE04_RS05610 WP_011149846.1 1117577..1117879(+) (comEA) [Vibrio vulnificus YJ016]
MKQVFTLLAMLMAFSFPSVSFADSATKAADKYEGIEISVNINTATAEEIAMMLKGVGIKKAQQIVDFREANGPFKTVDDL
AQVKGIGKSTIEKNQSRIKL
MKQVFTLLAMLMAFSFPSVSFADSATKAADKYEGIEISVNINTATAEEIAMMLKGVGIKKAQQIVDFREANGPFKTVDDL
AQVKGIGKSTIEKNQSRIKL
Nucleotide
Download Length: 303 bp
>NTDB_id=23129 BJE04_RS05610 WP_011149846.1 1117577..1117879(+) (comEA) [Vibrio vulnificus YJ016]
ATGAAACAGGTATTTACTCTTTTAGCCATGCTAATGGCATTCTCTTTTCCTTCCGTTTCTTTTGCGGACTCTGCAACGAA
AGCGGCCGATAAATATGAAGGCATTGAGATTTCCGTCAATATCAACACGGCGACAGCAGAAGAAATTGCCATGATGTTAA
AAGGCGTTGGTATTAAAAAAGCTCAGCAAATTGTTGATTTTAGAGAAGCTAATGGACCGTTTAAAACGGTTGATGATTTA
GCTCAAGTGAAAGGAATCGGTAAATCAACGATTGAGAAAAATCAGTCACGGATTAAGTTGTAA
ATGAAACAGGTATTTACTCTTTTAGCCATGCTAATGGCATTCTCTTTTCCTTCCGTTTCTTTTGCGGACTCTGCAACGAA
AGCGGCCGATAAATATGAAGGCATTGAGATTTCCGTCAATATCAACACGGCGACAGCAGAAGAAATTGCCATGATGTTAA
AAGGCGTTGGTATTAAAAAAGCTCAGCAAATTGTTGATTTTAGAGAAGCTAATGGACCGTTTAAAACGGTTGATGATTTA
GCTCAAGTGAAAGGAATCGGTAAATCAACGATTGAGAAAAATCAGTCACGGATTAAGTTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
60 |
100 |
0.6 |
| comEA | Vibrio campbellii strain DS40M4 |
55 |
100 |
0.55 |
| comEA | Vibrio cholerae C6706 |
53.061 |
98 |
0.52 |
| comEA | Vibrio cholerae strain A1552 |
53.061 |
98 |
0.52 |
| comE | Neisseria gonorrhoeae MS11 |
38.71 |
93 |
0.36 |
| comE | Neisseria gonorrhoeae MS11 |
38.71 |
93 |
0.36 |
| comE | Neisseria gonorrhoeae MS11 |
38.71 |
93 |
0.36 |
| comE | Neisseria gonorrhoeae MS11 |
38.71 |
93 |
0.36 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
60 |
60 |
0.36 |