Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | CV_RS20870 | Genome accession | NC_005085 |
| Coordinates | 4542652..4543119 (-) | Length | 155 a.a. |
| NCBI ID | WP_011137755.1 | Uniprot ID | Q7NQD1 |
| Organism | Chromobacterium violaceum ATCC 12472 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4537652..4548119
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CV_RS20855 (CV4206) | rpoH | 4537849..4538712 (+) | 864 | WP_011137752.1 | RNA polymerase sigma factor RpoH | - |
| CV_RS20860 (CV4207) | - | 4538803..4540587 (-) | 1785 | WP_011137753.1 | PglL family O-oligosaccharyltransferase | - |
| CV_RS20865 (CV4208) | - | 4540680..4542521 (-) | 1842 | WP_011137754.1 | PglL family O-oligosaccharyltransferase | - |
| CV_RS20870 (CV4209) | pilA2 | 4542652..4543119 (-) | 468 | WP_011137755.1 | pilin | Machinery gene |
| CV_RS20875 (CV4210) | - | 4543394..4544740 (+) | 1347 | WP_011137756.1 | adenosylmethionine--8-amino-7-oxononanoate transaminase | - |
| CV_RS20880 (CV4211) | - | 4544823..4546325 (+) | 1503 | WP_043596859.1 | hypothetical protein | - |
| CV_RS20885 (CV4212) | proB | 4546401..4547519 (+) | 1119 | WP_011137758.1 | glutamate 5-kinase | - |
Sequence
Protein
Download Length: 155 a.a. Molecular weight: 16162.33 Da Isoelectric Point: 8.9315
>NTDB_id=23076 CV_RS20870 WP_011137755.1 4542652..4543119(-) (pilA2) [Chromobacterium violaceum ATCC 12472]
MKKQRKQQGFTLIELMIVVAIVGILAAIAIPAYQDYTKRARVSEGLALADAAKTAVTEYYATNNAWASGTAPFNTTYGLA
ASITGNSVSSINVLANGVVQIAYNSTVSNGALVDLVPTVSAGSVQWYCTYTGSGTTAIASASQLSANWVPSTCRQ
MKKQRKQQGFTLIELMIVVAIVGILAAIAIPAYQDYTKRARVSEGLALADAAKTAVTEYYATNNAWASGTAPFNTTYGLA
ASITGNSVSSINVLANGVVQIAYNSTVSNGALVDLVPTVSAGSVQWYCTYTGSGTTAIASASQLSANWVPSTCRQ
Nucleotide
Download Length: 468 bp
>NTDB_id=23076 CV_RS20870 WP_011137755.1 4542652..4543119(-) (pilA2) [Chromobacterium violaceum ATCC 12472]
ATGAAGAAACAGCGTAAACAGCAGGGCTTCACCCTGATCGAACTGATGATCGTGGTCGCCATCGTCGGCATCCTGGCCGC
CATCGCCATTCCGGCCTATCAGGACTACACCAAGCGCGCGCGGGTGTCGGAAGGGTTGGCGCTGGCCGACGCGGCCAAGA
CGGCGGTGACCGAATACTACGCGACCAACAACGCGTGGGCCTCCGGCACCGCGCCTTTTAACACGACTTACGGATTGGCG
GCGTCCATTACGGGTAACTCGGTGAGCAGCATCAACGTTCTGGCGAACGGGGTGGTCCAGATCGCTTACAATTCGACAGT
ATCGAATGGTGCGTTGGTCGATCTGGTGCCGACCGTCAGCGCGGGCTCGGTGCAGTGGTACTGCACCTATACCGGCTCCG
GCACAACGGCCATCGCATCTGCTAGCCAACTGAGCGCCAACTGGGTGCCATCCACTTGCCGTCAGTAA
ATGAAGAAACAGCGTAAACAGCAGGGCTTCACCCTGATCGAACTGATGATCGTGGTCGCCATCGTCGGCATCCTGGCCGC
CATCGCCATTCCGGCCTATCAGGACTACACCAAGCGCGCGCGGGTGTCGGAAGGGTTGGCGCTGGCCGACGCGGCCAAGA
CGGCGGTGACCGAATACTACGCGACCAACAACGCGTGGGCCTCCGGCACCGCGCCTTTTAACACGACTTACGGATTGGCG
GCGTCCATTACGGGTAACTCGGTGAGCAGCATCAACGTTCTGGCGAACGGGGTGGTCCAGATCGCTTACAATTCGACAGT
ATCGAATGGTGCGTTGGTCGATCTGGTGCCGACCGTCAGCGCGGGCTCGGTGCAGTGGTACTGCACCTATACCGGCTCCG
GCACAACGGCCATCGCATCTGCTAGCCAACTGAGCGCCAACTGGGTGCCATCCACTTGCCGTCAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
50.667 |
96.774 |
0.49 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
50 |
96.774 |
0.484 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
46.25 |
100 |
0.477 |
| pilE | Neisseria gonorrhoeae MS11 |
45.342 |
100 |
0.471 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
40.828 |
100 |
0.445 |
| comP | Acinetobacter baylyi ADP1 |
41.509 |
100 |
0.426 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
33.696 |
100 |
0.4 |
| pilA | Haemophilus influenzae 86-028NP |
37.086 |
97.419 |
0.361 |