Detailed information NTG0230662

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: CCK83_RS04715
• Genome accession: NZ_CP021428
• Coordinates: 981135..983261 (-)
• Length: 708 a.a.
• NCBI ID: WP_017481729.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain HUMV-6483
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 976135..988261

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CCK83_RS04700	-	978557..979426 (-)	870	WP_039765203.1	hypothetical protein	-
CCK83_RS04705	aroB	979443..980525 (-)	1083	WP_087400195.1	3-dehydroquinate synthase	-
CCK83_RS04710	aroK	980554..981123 (-)	570	WP_002116987.1	shikimate kinase AroK	-
CCK83_RS04715	pilQ	981135..983261 (-)	2127	WP_017481729.1	type IV pilus secretin PilQ	Machinery gene
CCK83_RS04720	pilP	983324..983851 (-)	528	WP_002116864.1	pilus assembly protein PilP	Machinery gene
CCK83_RS04725	pilO	983862..984614 (-)	753	WP_032006367.1	type 4a pilus biogenesis protein PilO	Machinery gene
CCK83_RS04730	pilN	984611..985252 (-)	642	WP_002116944.1	PilN domain-containing protein	Machinery gene
CCK83_RS04735	pilM	985252..986310 (-)	1059	WP_032006368.1	pilus assembly protein PilM	Machinery gene

Sequence

Protein

• Length: 708 a.a.
• Molecular weight: 76722.19 Da
• Isoelectric Point: 6.7721

>NTDB_id=230662 CCK83_RS04715 WP_017481729.1 981135..983261(-) (pilQ) [Acinetobacter pittii strain HUMV-6483]
MNHVFRQFSMGAVAIAIMQVASAQVSMTNIVPTQIAGQGTEIRVIFNGLPPQPQAYQLENPSRLILDFNKAQQNLTQSKV
AIGTNEASSVDVSSDDQRSRLTVNLKEAGAFTTRIEGNTFILKINSAQVVAKPVSASAMQIQGVSNIGFQRGSQGEGLIV
IDLLGSNTPVDVQQQGSKVVVKTLGSKIPTHLAKRLNVNDFATPVSTIESYNDKGNGVITIQSTGSYEYMAYQAENKLTI
SLKRPQDKIVNTSSKPSNYSGNKLSLDFQDIEVRRVLQLLADFTGINMVAADSVQGNITLRLKDVPWDQALDIILKTKNL
DKRRNGNVIWIAPVAELIKAEDDEAKALAQTIKLAPIQTDYIRLNYAKAADVLKLIEETRDGKTAVANRTAGSDSLALES
LLSSRGSAVADTRTNTLIVNDTAQNIDKVRKMIDLIDVQIKQVMVEARIVRASTSFTKELGVKWGILSQGITNNNNLLVG
GSETTLWNLREPKKDETTGGYKYTIERPDNLNVDLGVTNPAGSIAFGLISMSDFMLDLELSALQADGYGEVISTPKVMTA
DKQPARVATGQQVPYQTTTNSAAGATASTSFKDALLSLDVTPSITPDGKIQMKLDISKDSVAGEAPNGELILNKNNINTN
VLVNNGETVILGGVFEQTTSNSQTKVPFFGDIPVVGRLFRKDVKSDDKQELLIFVTPRIVNDTLVRNH

Nucleotide

• Length: 2127 bp

>NTDB_id=230662 CCK83_RS04715 WP_017481729.1 981135..983261(-) (pilQ) [Acinetobacter pittii strain HUMV-6483]
ATGAATCACGTATTCCGTCAGTTTTCTATGGGAGCTGTGGCGATTGCAATTATGCAGGTTGCGTCTGCACAGGTCAGCAT
GACTAATATTGTACCGACGCAAATAGCGGGTCAGGGAACAGAAATTCGAGTGATATTTAATGGCTTGCCACCGCAACCAC
AGGCATATCAGCTTGAGAATCCTTCACGTTTGATTTTAGACTTTAATAAAGCGCAGCAGAATTTAACACAGTCAAAAGTA
GCGATTGGAACGAATGAAGCGAGTTCGGTCGATGTAAGCTCCGATGATCAGCGTTCACGTTTAACTGTTAATTTGAAAGA
GGCAGGTGCTTTTACAACTCGTATTGAAGGCAACACTTTTATTTTAAAGATTAATTCTGCGCAGGTTGTAGCTAAACCTG
TATCAGCAAGTGCAATGCAAATCCAAGGTGTTTCAAACATCGGCTTCCAACGCGGTAGTCAAGGGGAAGGTCTTATTGTT
ATTGACCTGTTGGGGAGTAATACCCCTGTTGATGTGCAACAACAAGGCAGCAAAGTTGTAGTAAAAACTTTGGGTTCTAA
AATTCCTACTCATTTAGCTAAGCGCTTAAATGTAAATGATTTTGCAACGCCTGTTTCGACCATTGAATCTTATAATGATA
AAGGCAACGGTGTTATTACGATTCAATCTACTGGTAGCTATGAATATATGGCTTATCAGGCGGAAAATAAATTAACCATC
AGTCTCAAGCGTCCTCAAGATAAAATTGTAAACACTTCATCTAAACCATCTAATTATTCTGGTAATAAGCTTTCTCTTGA
TTTTCAAGATATTGAAGTTCGTCGCGTTTTACAATTACTTGCTGATTTTACTGGCATTAATATGGTTGCGGCTGACAGTG
TGCAAGGTAACATCACTTTGCGTTTAAAAGATGTTCCATGGGATCAGGCACTTGATATTATTTTAAAAACTAAAAATTTA
GATAAACGCAGAAATGGTAATGTAATTTGGATTGCTCCAGTTGCGGAACTGATCAAGGCAGAAGACGATGAGGCAAAAGC
TTTAGCACAAACTATTAAATTAGCACCGATCCAAACAGATTATATTCGTTTGAATTATGCAAAAGCAGCAGATGTCCTTA
AACTAATTGAAGAGACTCGTGATGGCAAGACAGCTGTCGCAAATCGTACAGCAGGTTCAGACTCTCTTGCTTTAGAAAGC
TTATTAAGCTCAAGAGGTAGTGCTGTTGCCGATACGCGTACTAATACTTTGATTGTAAATGATACAGCCCAAAATATTGA
TAAAGTTCGTAAAATGATTGATTTGATTGATGTACAGATCAAACAAGTCATGGTGGAAGCTCGAATTGTAAGAGCTTCTA
CTTCTTTTACTAAAGAGCTCGGTGTTAAATGGGGAATATTATCGCAAGGGATTACCAACAATAATAATTTATTAGTTGGT
GGTAGCGAAACGACCTTATGGAATTTACGAGAGCCCAAAAAGGATGAGACTACGGGTGGTTATAAATACACGATTGAACG
TCCAGATAACTTAAATGTCGATTTGGGTGTAACCAATCCGGCTGGAAGTATTGCCTTTGGCTTGATTAGTATGTCTGATT
TTATGCTTGATCTCGAACTTTCTGCATTACAAGCTGACGGTTATGGTGAGGTGATTTCTACACCTAAAGTGATGACCGCA
GACAAACAACCTGCGAGAGTGGCAACAGGTCAACAAGTTCCTTATCAAACCACGACGAATTCTGCTGCGGGTGCTACAGC
AAGTACATCATTTAAAGATGCACTATTAAGCCTAGATGTTACCCCGAGCATTACGCCTGACGGTAAAATTCAAATGAAAT
TGGATATTTCTAAGGATTCTGTAGCTGGCGAAGCACCTAATGGTGAATTAATTTTAAATAAAAATAATATTAATACCAAT
GTACTTGTTAATAATGGTGAGACAGTCATTTTAGGAGGGGTGTTTGAGCAGACTACTTCTAATTCACAAACCAAGGTTCC
TTTCTTTGGAGACATTCCTGTAGTTGGGCGTTTATTTAGAAAAGATGTGAAATCTGATGATAAGCAAGAGTTACTGATTT
TCGTTACGCCACGAATTGTTAATGACACTTTGGTGAGAAATCATTAA

Domains

Predicted by InterproScan.

• Secretin and TonB N terminus short domain (STN) (291-333)

• Bacterial type II/III secretion system short domain (Secretin_N) (361-442)

• Bacterial type II and III secretion system protein (Secretin) (542-700)

• AMIN domain (AMIN) (39-118)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Acinetobacter baumannii D1279779	84.882	100	0.864
pilQ	Acinetobacter baumannii strain A118	84.743	100	0.863
comQ	Acinetobacter baylyi ADP1	73.566	100	0.743
pilQ	Pseudomonas aeruginosa PAK	39.829	99.294	0.395