Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   BC_RS18845 Genome accession   NC_004722
Coordinates   3752686..3753924 (-) Length   412 a.a.
NCBI ID   WP_000990694.1    Uniprot ID   Q81A15
Organism   Bacillus cereus ATCC 14579     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 3747686..3758924
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BC_RS18825 (BC3776) spoVS 3748099..3748359 (-) 261 WP_000404341.1 stage V sporulation protein SpoVS -
  BC_RS18830 (BC3777) - 3748509..3749303 (-) 795 WP_001221095.1 TIGR00282 family metallophosphoesterase -
  BC_RS18835 (BC3778) rny 3749466..3751028 (-) 1563 WP_000204912.1 ribonuclease Y -
  BC_RS18840 (BC3779) recA 3751511..3752542 (-) 1032 WP_001283860.1 recombinase RecA Machinery gene
  BC_RS18845 (BC3780) cinA 3752686..3753924 (-) 1239 WP_000990694.1 competence/damage-inducible protein A Machinery gene
  BC_RS18850 (BC3781) pgsA 3753945..3754523 (-) 579 WP_001052967.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  BC_RS18855 (BC3782) - 3754588..3755499 (-) 912 WP_000137461.1 helix-turn-helix domain-containing protein -
  BC_RS18860 (BC3783) - 3755521..3756306 (-) 786 WP_000574107.1 DUF3388 domain-containing protein -
  BC_RS18865 (BC3784) - 3756449..3756694 (-) 246 WP_000114451.1 DUF3243 domain-containing protein -
  BC_RS18870 (BC3785) - 3756770..3757483 (-) 714 WP_000759609.1 elongation factor P 5-aminopentanone reductase -
  BC_RS18875 (BC3786) - 3757584..3758870 (-) 1287 WP_000411976.1 EF-P 5-aminopentanol modification-associated protein YfmH -

Sequence

Protein


Download         Length: 412 a.a.        Molecular weight: 45592.92 Da        Isoelectric Point: 5.3596

>NTDB_id=22928 BC_RS18845 WP_000990694.1 3752686..3753924(-) (cinA) [Bacillus cereus ATCC 14579]
MNAEIIAVGTELLLGQIANTNAQFLSEKLASIGINVYYHTVVGDNNKRLQKAIEAAEERADILIFTGGLGPTKDDLTKET
IAASLDEELVYDEKALALISNYFKRTGREFTENNKKQALVLNGATVFANDHGMAPGMGVNKNRKSYILLPGPPKEMKPMY
VSYVEPFLRNFTTGENIYSRVLRFFGIGESQLEVKVQDLIDGQTNPTIAPLANDGEVTLRLTAKHQNVSEAEKLIQHVED
LILERVGEFFYGYDQEFLHYKAIELLKRKGLTLACAESLTGGLFGNQVTENAGVSSVFKGGVICYHNDVKQYVLRVPEEV
LHTDGAVSKECARYLAENVKDVLKADIGISFTGVAGPDASEQKEPGTVFVGLSIKDEPTVVFPLNLSGSRQQIRERTAKY
GFYHLYKKLEEI

Nucleotide


Download         Length: 1239 bp        

>NTDB_id=22928 BC_RS18845 WP_000990694.1 3752686..3753924(-) (cinA) [Bacillus cereus ATCC 14579]
ATGAATGCTGAGATTATTGCGGTTGGAACTGAATTATTACTTGGACAAATTGCAAATACAAATGCCCAGTTTTTATCTGA
AAAGTTAGCTTCAATCGGAATTAACGTGTACTATCATACTGTTGTTGGTGATAATAATAAGCGATTGCAAAAGGCGATTG
AAGCTGCGGAAGAACGTGCTGATATACTTATTTTTACAGGTGGATTAGGACCGACAAAAGATGATTTAACGAAAGAAACG
ATAGCTGCTAGTTTAGATGAAGAGCTTGTGTATGATGAAAAGGCATTAGCCTTAATAAGTAATTACTTTAAGCGTACAGG
CCGTGAATTTACGGAGAATAATAAAAAGCAAGCGCTCGTTTTAAATGGAGCAACAGTATTTGCAAATGACCACGGTATGG
CGCCGGGTATGGGGGTAAATAAGAACCGGAAAAGTTATATTTTATTACCAGGGCCGCCAAAAGAAATGAAACCAATGTAT
GTAAGTTACGTAGAGCCTTTTTTACGTAATTTTACAACAGGAGAAAACATTTATTCTCGTGTGCTTCGTTTCTTCGGCAT
TGGGGAGTCCCAATTAGAGGTGAAAGTTCAAGATTTAATTGATGGACAAACAAACCCAACAATTGCCCCGTTAGCAAATG
ATGGAGAAGTGACATTACGTTTAACCGCTAAGCATCAAAATGTTAGCGAAGCGGAGAAACTAATTCAACATGTGGAAGAT
TTGATTTTAGAAAGAGTAGGAGAATTTTTCTACGGATATGACCAAGAATTTTTGCATTATAAGGCAATCGAGTTATTGAA
GAGAAAAGGGTTAACTTTAGCGTGTGCAGAAAGTTTAACAGGTGGTCTTTTTGGAAATCAAGTAACTGAAAACGCTGGTG
TTTCTTCTGTGTTTAAAGGCGGTGTCATTTGTTATCATAATGATGTGAAGCAATATGTTTTACGTGTGCCTGAAGAAGTG
TTGCATACTGATGGTGCAGTTAGTAAAGAATGTGCTCGTTATCTTGCTGAAAATGTTAAGGATGTACTAAAAGCGGATAT
TGGAATTAGTTTCACTGGGGTAGCAGGGCCAGATGCTTCAGAACAGAAAGAACCAGGAACAGTATTTGTTGGGCTTTCGA
TTAAGGATGAACCAACTGTAGTCTTTCCTCTTAATTTAAGCGGAAGTCGTCAACAAATTAGAGAACGAACAGCAAAATAT
GGATTTTATCATTTATATAAAAAGCTAGAAGAGATATAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(258-408)

Damage-inducible protein CinA KH domain (CinA_KH)

(179-252)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q81A15

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

58.252

100

0.583
  cinA Streptococcus pneumoniae TIGR4

46.539

100

0.473
  cinA Streptococcus mitis SK321

46.301

100

0.471
  cinA Streptococcus pneumoniae Rx1

46.062

100

0.468
  cinA Streptococcus pneumoniae R6

46.062

100

0.468
  cinA Streptococcus pneumoniae D39

45.823

100

0.466
  cinA Streptococcus mitis NCTC 12261

45.585

100

0.464
  cinA Streptococcus mutans UA159

45.074

98.544

0.444
  cinA Streptococcus suis isolate S10

40.053

91.505

0.367

Multiple sequence alignment