Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   A6J31_RS06410 Genome accession   NZ_CP020431
Coordinates   1241900..1243870 (-) Length   656 a.a.
NCBI ID   WP_080610742.1    Uniprot ID   A0A1V0GDY7
Organism   Streptococcus sp. FDAARGOS_192     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1236900..1248870
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J31_RS06390 (A6J31_06325) amiF 1237403..1238332 (-) 930 WP_080610739.1 ATP-binding cassette domain-containing protein Regulator
  A6J31_RS06395 (A6J31_06330) amiE 1238325..1239410 (-) 1086 WP_080610740.1 ABC transporter ATP-binding protein Regulator
  A6J31_RS06400 (A6J31_06335) amiD 1239420..1240346 (-) 927 WP_002886846.1 oligopeptide ABC transporter permease OppC Regulator
  A6J31_RS06405 (A6J31_06340) amiC 1240346..1241839 (-) 1494 WP_080610741.1 ABC transporter permease Regulator
  A6J31_RS06410 (A6J31_06345) amiA 1241900..1243870 (-) 1971 WP_080610742.1 peptide ABC transporter substrate-binding protein Regulator
  A6J31_RS06415 (A6J31_06350) amiA 1244051..1246021 (-) 1971 WP_080610743.1 peptide ABC transporter substrate-binding protein Regulator
  A6J31_RS06420 (A6J31_06355) pta 1246258..1247241 (-) 984 WP_021143808.1 phosphate acetyltransferase -
  A6J31_RS06425 (A6J31_06360) - 1247256..1248152 (-) 897 WP_080610744.1 RluA family pseudouridine synthase -

Sequence

Protein


Download         Length: 656 a.a.        Molecular weight: 72910.31 Da        Isoelectric Point: 5.2837

>NTDB_id=222880 A6J31_RS06410 WP_080610742.1 1241900..1243870(-) (amiA) [Streptococcus sp. FDAARGOS_192]
MKKSKWLALAGVSLLSVGVLVACSSKSNTSSNTYNYIYTADPETLDYLISNKGSTTDAVTNGVDGLLENDKYGNLVPAIA
KDWTVSADGLTYTYKLRKGVKWYTSDGEEYAEVTAKDFVTGLKHAADKKTESIYLAKDSVVGLADYFNGTDKDFSKVGVK
ALDDYTLQYTLKQPEPYWNSKMTYSLFWPVNEEFLKSKGDSFGKSTDPSSILYNGPYILKSLTAKSSIELTKNENYWDKK
NVHFDGIKLSFYDASDQESLVRNFTDGAYSQARLYPTSSNFDSVEKQYKDNIFYTQPSADIGGVGVNIDRQSYNHTSKKT
DAEKDSTKKALLNKDFRQSVNFAIDRTAYSAQLNGEKGAALAVRNLLVKPDFVYAGDKSFGDLVTEKMASYGDEWSGVNL
KDSQDGLFNADKAKTEFNKAKEALQAQGVQFPIHLDLPVDQAAKPTVARAQSLKQSVEKTLGKENVVVDVHQMSQDDLLN
STLYAANAAAEDWDINISVAWAPDYEDPSTFLDIFKTTASENTKTYMGFDDPNSAAAAQVGLKDFDALVDNAAKETSNLN
VRYERYAEAQAWLEDSSLFMPLMVNKGAAPMVARLTPFSGAYSQVGPKGSDRYFKYLEPQKDVVTKKNYDKARESWLKEK
SKSNEKAQKDLEKHVK

Nucleotide


Download         Length: 1971 bp        

>NTDB_id=222880 A6J31_RS06410 WP_080610742.1 1241900..1243870(-) (amiA) [Streptococcus sp. FDAARGOS_192]
ATGAAAAAAAGTAAATGGTTGGCCCTTGCGGGTGTTTCCCTCCTAAGTGTTGGGGTTTTAGTGGCTTGTTCATCAAAATC
AAACACTTCAAGCAATACTTATAACTATATTTATACTGCTGATCCTGAAACGTTGGATTATCTTATTTCCAATAAAGGTT
CAACAACTGATGCTGTGACAAATGGTGTCGATGGTCTTTTGGAAAACGATAAATATGGTAACTTGGTACCTGCTATTGCC
AAGGATTGGACTGTTTCAGCTGATGGTTTGACTTATACTTACAAACTTCGTAAGGGAGTTAAATGGTATACTTCAGACGG
TGAAGAGTATGCGGAAGTAACAGCTAAAGACTTCGTAACAGGTCTTAAACACGCTGCTGATAAAAAGACAGAGTCAATCT
ATTTAGCAAAAGATTCTGTAGTAGGTCTTGCTGATTATTTCAATGGTACTGATAAAGACTTCTCTAAAGTTGGTGTTAAA
GCACTTGATGACTACACTCTTCAGTACACTCTTAAACAACCAGAACCATACTGGAATTCTAAGATGACTTATTCTCTCTT
CTGGCCTGTTAACGAAGAGTTCCTTAAGTCAAAAGGGGATAGCTTTGGTAAATCAACAGATCCATCATCTATCCTTTATA
ATGGTCCATACATCCTTAAGTCATTGACAGCTAAATCATCTATTGAGTTGACTAAAAATGAAAACTATTGGGATAAGAAG
AATGTTCACTTTGATGGCATCAAACTTTCTTTCTACGATGCATCTGACCAAGAATCACTTGTCCGTAATTTCACTGATGG
CGCTTATAGTCAAGCACGTTTATATCCAACAAGCTCAAACTTTGATTCAGTAGAAAAACAATATAAAGATAATATCTTCT
ATACACAACCATCTGCAGATATTGGTGGGGTTGGTGTTAATATTGACCGTCAGTCTTACAACCATACATCTAAGAAGACT
GATGCTGAGAAAGATTCAACTAAGAAAGCTCTTCTTAACAAGGACTTCCGTCAATCAGTTAACTTCGCTATTGACCGTAC
TGCTTATTCAGCACAACTTAATGGTGAAAAAGGTGCAGCCCTTGCAGTTCGTAACCTTCTTGTAAAACCTGATTTTGTTT
ATGCTGGTGACAAGTCATTCGGTGATTTGGTAACTGAAAAGATGGCTTCATATGGTGATGAGTGGTCTGGGGTTAACCTT
AAAGACAGTCAAGATGGTCTCTTCAACGCTGATAAGGCTAAGACTGAATTTAATAAAGCTAAGGAAGCCCTCCAAGCACA
AGGTGTTCAATTCCCAATTCACTTGGACCTTCCAGTTGACCAAGCTGCGAAACCAACTGTAGCACGTGCACAATCTTTGA
AACAATCTGTTGAAAAGACACTTGGTAAAGAAAATGTTGTTGTAGACGTTCATCAAATGTCTCAAGATGATCTTCTTAAC
AGTACTTTGTATGCAGCTAACGCAGCAGCAGAAGACTGGGATATCAATATTTCAGTTGCTTGGGCACCTGACTATGAAGA
CCCATCAACATTCCTTGATATCTTCAAGACAACAGCTAGTGAGAACACAAAAACTTACATGGGATTTGACGATCCTAACA
GTGCAGCAGCAGCTCAAGTAGGTCTTAAAGACTTTGATGCTTTGGTTGACAATGCAGCTAAGGAAACAAGCAACCTCAAC
GTACGTTATGAACGTTATGCAGAGGCACAAGCTTGGTTGGAAGATAGCTCACTCTTCATGCCACTTATGGTTAACAAGGG
TGCAGCTCCAATGGTAGCTCGTTTGACACCATTCTCAGGAGCCTACTCTCAAGTAGGACCTAAGGGTTCTGACAGATACT
TCAAGTACCTTGAGCCTCAAAAAGATGTTGTCACTAAGAAAAACTATGATAAAGCCCGTGAAAGCTGGCTTAAAGAAAAG
TCTAAGTCCAACGAAAAAGCTCAAAAAGACCTTGAGAAACACGTTAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(75-520)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1V0GDY7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

75

100

0.75
  amiA3 Streptococcus thermophilus LMG 18311

74.581

100

0.747
  amiA3 Streptococcus thermophilus LMD-9

74.581

100

0.747

Multiple sequence alignment