Detailed information
Bioinformatically predicted
Overview
| Name | ymcA | Type | Regulator |
| Locus tag | C2H97_RS18245 | Genome accession | NZ_CP026038 |
| Coordinates | 3483172..3483603 (+) | Length | 143 a.a. |
| NCBI ID | WP_003231834.1 | Uniprot ID | G4NVD0 |
| Organism | Bacillus subtilis PY79 strain PK1_3 | ||
| Function | accelerate the production of Spo0A~P (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3478172..3488603
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2H97_RS18225 (C2H97_18240) | spoVS | 3478734..3478994 (+) | 261 | WP_003154135.1 | stage V sporulation protein SpoVS | - |
| C2H97_RS18230 (C2H97_18245) | tdh | 3479259..3480302 (+) | 1044 | WP_049140039.1 | L-threonine 3-dehydrogenase | - |
| C2H97_RS18235 (C2H97_18250) | kbl | 3480315..3481493 (+) | 1179 | WP_015715903.1 | glycine C-acetyltransferase | - |
| C2H97_RS18240 (C2H97_18255) | miaB | 3481641..3483170 (+) | 1530 | WP_049140040.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| C2H97_RS18245 (C2H97_18260) | ymcA | 3483172..3483603 (+) | 432 | WP_003231834.1 | regulatory iron-sulfur-containing complex subunit RicA | Regulator |
| C2H97_RS18250 (C2H97_18265) | cotE | 3483865..3484410 (+) | 546 | WP_003231833.1 | outer spore coat protein CotE | - |
| C2H97_RS18255 (C2H97_18270) | hexA | 3484543..3487119 (+) | 2577 | WP_120028098.1 | DNA mismatch repair protein MutS | Machinery gene |
Sequence
Protein
Download Length: 143 a.a. Molecular weight: 16166.27 Da Isoelectric Point: 5.0437
>NTDB_id=222877 C2H97_RS18245 WP_003231834.1 3483172..3483603(+) (ymcA) [Bacillus subtilis PY79 strain PK1_3]
MTLYSKKDIVQQARNLAKMISETEEVDFFKRAEAQINENDKVSTIVNQIKALQKQAVNLKHYEKHEALKQVEAKIDALQE
ELEEIPVIQEFRDSQMEVNDLLQLVAHTISNQVTNEIITSTGGDLLKGETGSKVKHSNNSCSL
MTLYSKKDIVQQARNLAKMISETEEVDFFKRAEAQINENDKVSTIVNQIKALQKQAVNLKHYEKHEALKQVEAKIDALQE
ELEEIPVIQEFRDSQMEVNDLLQLVAHTISNQVTNEIITSTGGDLLKGETGSKVKHSNNSCSL
Nucleotide
Download Length: 432 bp
>NTDB_id=222877 C2H97_RS18245 WP_003231834.1 3483172..3483603(+) (ymcA) [Bacillus subtilis PY79 strain PK1_3]
ATGACGCTCTACTCAAAAAAAGACATTGTGCAGCAGGCACGAAACCTTGCAAAAATGATTTCTGAAACAGAAGAGGTTGA
TTTTTTCAAACGGGCTGAAGCGCAAATCAATGAGAATGACAAAGTGTCCACAATCGTTAATCAGATTAAAGCCCTGCAAA
AGCAGGCTGTCAATCTGAAGCATTATGAAAAGCATGAAGCGCTCAAACAAGTAGAAGCAAAAATTGACGCGCTGCAAGAA
GAGCTTGAAGAGATTCCTGTTATCCAGGAATTCAGAGACTCGCAGATGGAAGTAAATGACCTACTGCAGCTCGTTGCACA
CACCATTTCCAACCAAGTCACAAATGAAATCATCACATCAACCGGAGGCGACCTGCTGAAAGGGGAAACCGGTTCAAAGG
TGAAGCATTCAAATAACAGTTGTTCTCTCTAA
ATGACGCTCTACTCAAAAAAAGACATTGTGCAGCAGGCACGAAACCTTGCAAAAATGATTTCTGAAACAGAAGAGGTTGA
TTTTTTCAAACGGGCTGAAGCGCAAATCAATGAGAATGACAAAGTGTCCACAATCGTTAATCAGATTAAAGCCCTGCAAA
AGCAGGCTGTCAATCTGAAGCATTATGAAAAGCATGAAGCGCTCAAACAAGTAGAAGCAAAAATTGACGCGCTGCAAGAA
GAGCTTGAAGAGATTCCTGTTATCCAGGAATTCAGAGACTCGCAGATGGAAGTAAATGACCTACTGCAGCTCGTTGCACA
CACCATTTCCAACCAAGTCACAAATGAAATCATCACATCAACCGGAGGCGACCTGCTGAAAGGGGAAACCGGTTCAAAGG
TGAAGCATTCAAATAACAGTTGTTCTCTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ymcA | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |