Detailed information NTG0222878

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: A6J31_RS06400
• Genome accession: NZ_CP020431
• Coordinates: 1239420..1240346 (-)
• Length: 308 a.a.
• NCBI ID: WP_002886846.1
• Uniprot ID: A0A0F3HAC7
• Organism: Streptococcus sp. FDAARGOS_192
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1234420..1245346

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J31_RS06370 (A6J31_06305)	-	1234498..1235292 (-)	795	WP_080610737.1	HAD-IIB family hydrolase	-
A6J31_RS06375 (A6J31_06310)	-	1235474..1235851 (+)	378	WP_060971837.1	GntR family transcriptional regulator	-
A6J31_RS06380 (A6J31_06315)	-	1235856..1236554 (+)	699	WP_080610738.1	ABC transporter ATP-binding protein	-
A6J31_RS06385 (A6J31_06320)	-	1236566..1237351 (+)	786	WP_021143813.1	hypothetical protein	-
A6J31_RS06390 (A6J31_06325)	amiF	1237403..1238332 (-)	930	WP_080610739.1	ATP-binding cassette domain-containing protein	Regulator
A6J31_RS06395 (A6J31_06330)	amiE	1238325..1239410 (-)	1086	WP_080610740.1	ABC transporter ATP-binding protein	Regulator
A6J31_RS06400 (A6J31_06335)	amiD	1239420..1240346 (-)	927	WP_002886846.1	oligopeptide ABC transporter permease OppC	Regulator
A6J31_RS06405 (A6J31_06340)	amiC	1240346..1241839 (-)	1494	WP_080610741.1	ABC transporter permease	Regulator
A6J31_RS06410 (A6J31_06345)	amiA	1241900..1243870 (-)	1971	WP_080610742.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34607.77 Da
• Isoelectric Point: 9.7054

>NTDB_id=222878 A6J31_RS06400 WP_002886846.1 1239420..1240346(-) (amiD) [Streptococcus sp. FDAARGOS_192]
MASIDKSKFQFVKRDDFASETIDAPAYSYWKSVMRQFFKKKSTVVMLGILIAIVLMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDSNGKSLFDSVWFGARNSILIAVIATFLNVVIGLLVGAVWGISKTFDMIMMEIYNIISNIPALLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRTLGTPTAKIVVKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=222878 A6J31_RS06400 WP_002886846.1 1239420..1240346(-) (amiD) [Streptococcus sp. FDAARGOS_192]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCAGCTTA
TTCTTACTGGAAATCAGTGATGCGTCAATTCTTTAAAAAGAAATCAACAGTAGTAATGTTGGGTATCTTGATTGCCATCG
TTTTGATGAGTTTCATCTATCCAATGTTCTCTAAATTTGACTTCAATGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACAGTAATGGTAAGTCCCTCTTTGATAGTGTTTGGTTTGGAGC
TCGTAATTCTATCCTTATTGCTGTTATCGCTACCTTCCTTAATGTTGTCATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCTGCCCTCCTTGTAGTTATCGTC
TTGACTTACTCATTGGGTGCTGGTTTCTGGAATATGATCTTTGCCATGACTGTCACAGGTTGGATTGGTATTGCTTATAC
CATTCGTATTCAAATCATGCGTTACCGTGATTTGGAGTACAACTTGGCTTCTCGTACACTGGGAACGCCAACTGCTAAGA
TTGTGGTTAAAAACATCATGCCGCAACTTGTGTCAGTTATCGTAACTATGGCTAGTCAACTCTTGCCAGGATTTATCTCT
TACGAAGCCTTCCTTTCATACTTTGGTTTGGGGCTTCCCGTTACGACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTTAATGCTTATCTCTTCTGGATTCCATTGACTACCTTGATTCTCGTTTCCCTTGCTCTCTTTATTG
TCGGTCAAAACTTGGCGGATGCCAGCGACCCACGTACGCATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

3D structure

• AlphaFold DB: A0A0F3HAC7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	98.377	100	0.984
amiD	Streptococcus thermophilus LMG 18311	97.403	100	0.974
amiD	Streptococcus thermophilus LMD-9	97.403	100	0.974