Detailed information NTG0220071

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: OTEC02_RS01510
• Genome accession: NZ_CP020015
• Coordinates: 313388..314446 (+)
• Length: 352 a.a.
• NCBI ID: WP_057104815.1
• Uniprot ID: -
• Organism: Acinetobacter lactucae strain OTEC-02
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 308388..319446

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OTEC02_RS01495 (OTEC02_01495)	-	309490..309822 (+)	333	WP_016143665.1	hypothetical protein	-
OTEC02_RS01500 (OTEC02_01500)	-	309825..310649 (+)	825	WP_081172658.1	putative RNA methyltransferase	-
OTEC02_RS01505 (OTEC02_01505)	ponA	310665..313226 (-)	2562	WP_155859195.1	penicillin-binding protein PBP1a	-
OTEC02_RS01510 (OTEC02_01510)	comM	313388..314446 (+)	1059	WP_057104815.1	pilus assembly protein PilM	Machinery gene
OTEC02_RS01515 (OTEC02_01515)	pilN	314446..315087 (+)	642	WP_031949513.1	PilN domain-containing protein	Machinery gene
OTEC02_RS01520 (OTEC02_01520)	pilO	315084..315863 (+)	780	WP_081172659.1	type 4a pilus biogenesis protein PilO	Machinery gene
OTEC02_RS01525 (OTEC02_01525)	pilP	315875..316402 (+)	528	WP_081172660.1	pilus assembly protein PilP	Machinery gene
OTEC02_RS01530 (OTEC02_01530)	pilQ	316465..318630 (+)	2166	WP_081172661.1	type IV pilus secretin PilQ	Machinery gene
OTEC02_RS01535 (OTEC02_01535)	aroK	318642..319211 (+)	570	WP_081172662.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39059.64 Da
• Isoelectric Point: 4.4217

>NTDB_id=220071 OTEC02_RS01510 WP_057104815.1 313388..314446(+) (comM) [Acinetobacter lactucae strain OTEC-02]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALTPLPENSVVEKNILNPEAVAEALERAMNLANPQTSNAAI
AVPTSTVIHKTIEMDADMNDDEREVQIRLDAEQYIPFPLDEVSLDFEVLPDRLPNPNRVNVLLVATRTENVETRVEVLEL
VDLTPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
AGRAKKERSLPDDYDIEILEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDIQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=220071 OTEC02_RS01510 WP_057104815.1 313388..314446(+) (comM) [Acinetobacter lactucae strain OTEC-02]
GTGCTCAGGTTATATCGTAAACCGAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTTAAGAACGGTAAATATTGGGTGGAAAGCTATGCTTTAACACCTTTACCTGAGAACAGTGTAGTTGAAAAAAATA
TCTTGAATCCTGAAGCAGTTGCAGAAGCTTTGGAAAGGGCGATGAATTTAGCAAATCCCCAAACCAGTAACGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAACGATGATGAGCGTGAAGTTCAGAT
TCGATTAGATGCGGAGCAATATATACCGTTCCCTTTGGATGAAGTGAGCCTTGATTTTGAGGTTTTACCAGATCGACTGC
CAAATCCAAATCGTGTGAATGTACTTTTAGTCGCAACGCGCACAGAAAATGTTGAAACACGCGTAGAAGTACTGGAACTG
GTAGATTTAACGCCTAAACTTGCTGATGTCGAGAGTTATGCTGTCGAGCGTGCTTTTAGTGTATTTGCTGATAGCTTACC
CATGGGTGCAAATACCATTGGTATTTTAGATATTGGCCATACCATGACCACATTATCGGTTATGCAAAATGGTAAAATCA
TTTATACCCGTGAACAAGTCTTTGGTGGCAAACAGCTTACTTTGGAAATTCAAAGCCGTTATGGCTTGTCATTAGAAGAA
GCGGGACGCGCTAAAAAAGAACGTTCTTTGCCAGATGATTATGACATCGAAATCTTAGAACCATTTTTAGATGCTGTAGT
TCAGCAAGCTGCTAGATCTCTACAATTTTTCTTCTCTTCATCCCAATTCAATGAAATAGATCATATTTTGCTTGCAGGTG
GTAATGCCAACATTCCAGGCCTTGCGAAATTGTTGCAGCAAAAACTTGGTTACCGAGTCACTATTGCTAATCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGATATTCAAAAAATTGAAAATGATGCCTCATCATTAATGGTGGCGTGTGGCTTGGC
CTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	96.023	100	0.96
pilM	Acinetobacter baumannii D1279779	96.023	100	0.96
comM	Acinetobacter baylyi ADP1	81.818	100	0.818
pilM	Legionella pneumophila strain ERS1305867	41.808	100	0.42