Detailed information NTG0220075

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: OTEC02_RS01530
• Genome accession: NZ_CP020015
• Coordinates: 316465..318630 (+)
• Length: 721 a.a.
• NCBI ID: WP_081172661.1
• Uniprot ID: -
• Organism: Acinetobacter lactucae strain OTEC-02
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 311465..323630

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OTEC02_RS01510 (OTEC02_01510)	comM	313388..314446 (+)	1059	WP_057104815.1	pilus assembly protein PilM	Machinery gene
OTEC02_RS01515 (OTEC02_01515)	pilN	314446..315087 (+)	642	WP_031949513.1	PilN domain-containing protein	Machinery gene
OTEC02_RS01520 (OTEC02_01520)	pilO	315084..315863 (+)	780	WP_081172659.1	type 4a pilus biogenesis protein PilO	Machinery gene
OTEC02_RS01525 (OTEC02_01525)	pilP	315875..316402 (+)	528	WP_081172660.1	pilus assembly protein PilP	Machinery gene
OTEC02_RS01530 (OTEC02_01530)	pilQ	316465..318630 (+)	2166	WP_081172661.1	type IV pilus secretin PilQ	Machinery gene
OTEC02_RS01535 (OTEC02_01535)	aroK	318642..319211 (+)	570	WP_081172662.1	shikimate kinase AroK	-
OTEC02_RS01540 (OTEC02_01540)	aroB	319240..320322 (+)	1083	WP_061875201.1	3-dehydroquinate synthase	-
OTEC02_RS01545 (OTEC02_01545)	-	320339..321220 (+)	882	WP_081172663.1	hypothetical protein	-

Sequence

Protein

• Length: 721 a.a.
• Molecular weight: 77971.30 Da
• Isoelectric Point: 5.9819

>NTDB_id=220075 OTEC02_RS01530 WP_081172661.1 316465..318630(+) (pilQ) [Acinetobacter lactucae strain OTEC-02]
MNHVFSQFSMGAVAIAIMQVASAQVSMTNIVPTQIAGQGTEIRVMFNGLPPQPQAYQLENPSRLILDFNKAQQNLTQSKV
AIGTNEASSVDVSSDDQRSRLTVNLKEAGAFTTRIEGNTFILKINTAQAIAKPAQTSVMQPQGVSNIGFQRGGQGEGLIV
IDLLGSNTPVDVQQQGSKVVVKTLGSKIPAHLAKRLNVNDFATPVSTIESYNEKGNGVITIQSTGSYEYMAYQAENKLTI
SLKRPQDKNVTSLYKTPNYSGNKLSLDFQDIEVRRVLQLLADFTGINMVAADSVQGNITLRLKDVPWDQALDIILKTKNL
DKRRNGNVIWIAPVTELIKAEEEEAKAVAQSVKLAPLQTEYIQLKYARAQDIMSLVTKGSNNSNGLQSTSGGGTSTSTNL
NTGVDSLGNNVGSLLSPRGTITQDDRTNTLIINDTAQSIDQIRKMIDLLDVQVKQVMVEARIVRASTSFTKELGVKWGIL
SQGITNNNNLLVGGSETTLWNLREPKKDETTGGYKYTIERPDNLNVDLGVTNPAGSIAFGLISMSDFMLDLELSALQADG
YGEVISTPKVMTADKQSARVATGQQVPYQTTTNSAAGATASTSFKDALLSLDVTPSITPDGKIQMKLDISKDSVAGEAPN
GELILNKNNINTNVLVNNGETVILGGVFEQTTSNSQTKVPFFGDIPVVGRLFRKDVKSDDKQELLIFVTPRIVNDTLVRN
H

Nucleotide

• Length: 2166 bp

>NTDB_id=220075 OTEC02_RS01530 WP_081172661.1 316465..318630(+) (pilQ) [Acinetobacter lactucae strain OTEC-02]
ATGAATCACGTATTCAGTCAGTTTTCTATGGGGGCTGTAGCGATTGCAATTATGCAGGTTGCATCTGCACAGGTCAGCAT
GACCAATATTGTACCGACGCAAATAGCGGGTCAGGGTACGGAAATTCGAGTGATGTTTAATGGTTTGCCGCCGCAACCAC
AGGCATATCAACTTGAAAATCCTTCACGTTTGATTTTAGATTTTAATAAAGCGCAGCAGAATCTCACACAGTCAAAAGTA
GCGATTGGAACGAATGAGGCGAGCTCTGTCGATGTGAGCTCTGATGATCAGCGTTCACGTTTGACTGTCAATTTAAAAGA
AGCAGGTGCTTTTACTACTCGTATTGAAGGCAATACTTTTATTTTAAAAATTAATACAGCTCAAGCTATAGCGAAGCCCG
CACAAACAAGTGTGATGCAACCCCAAGGTGTTTCAAATATTGGCTTTCAGCGCGGTGGTCAAGGAGAAGGCCTTATTGTT
ATCGATTTGCTAGGTAGTAATACCCCTGTTGATGTGCAGCAACAAGGTAGCAAAGTTGTAGTAAAAACATTAGGTTCTAA
AATTCCCGCGCATTTAGCTAAACGCTTAAATGTTAATGATTTTGCTACACCTGTTTCGACAATTGAATCTTATAACGAAA
AAGGCAATGGTGTTATTACGATCCAATCCACTGGTAGCTATGAATATATGGCTTATCAGGCGGAAAATAAATTGACCATT
AGCTTAAAGCGTCCGCAGGACAAAAATGTAACCTCTTTATATAAGACACCTAATTACTCTGGGAATAAGCTTTCTCTTGA
TTTCCAAGATATTGAAGTCCGTCGCGTTTTACAATTATTGGCAGATTTTACTGGCATTAATATGGTTGCGGCTGACAGCG
TTCAAGGTAATATTACTTTGCGTTTAAAAGATGTTCCGTGGGACCAAGCACTTGATATTATTTTAAAAACTAAAAATTTA
GATAAACGCAGAAATGGAAATGTAATTTGGATTGCTCCAGTTACAGAATTGATTAAGGCCGAAGAAGAAGAGGCGAAAGC
TGTTGCACAGAGTGTGAAATTAGCGCCATTGCAAACTGAGTATATTCAACTGAAATATGCACGAGCTCAAGATATTATGA
GCTTAGTTACCAAAGGCTCAAACAATAGTAATGGTTTGCAGAGTACATCTGGCGGGGGTACTTCAACCTCAACCAATTTA
AATACTGGTGTTGATAGTTTAGGGAATAATGTAGGAAGTTTATTGAGTCCACGTGGAACAATTACTCAAGATGATCGTAC
CAATACCTTAATTATTAATGATACGGCTCAGTCGATTGATCAAATTCGTAAAATGATAGATTTGCTGGATGTACAAGTTA
AACAAGTCATGGTTGAAGCTCGTATTGTAAGAGCCTCTACTTCTTTTACAAAAGAACTTGGCGTTAAATGGGGCATATTA
TCGCAAGGCATTACCAACAATAATAATTTGTTAGTTGGTGGTAGTGAAACGACCTTGTGGAATCTAAGAGAACCTAAAAA
AGATGAGACCACGGGTGGCTATAAATATACGATTGAACGCCCAGATAATTTAAATGTTGATTTAGGGGTAACTAATCCAG
CTGGAAGCATTGCCTTTGGCTTGATTAGTATGTCGGATTTTATGCTTGATCTTGAACTTTCTGCCCTACAAGCTGATGGT
TATGGTGAGGTGATTTCCACACCTAAAGTGATGACCGCAGATAAACAATCTGCCAGAGTGGCGACAGGTCAACAAGTCCC
TTATCAAACCACGACGAATTCTGCTGCTGGCGCTACAGCAAGTACTTCTTTTAAAGATGCGCTTTTAAGCCTGGACGTTA
CTCCGAGCATTACCCCTGACGGTAAAATTCAAATGAAATTGGATATTTCGAAGGATTCTGTTGCTGGTGAAGCACCTAAT
GGTGAGTTAATTTTAAATAAAAATAATATCAATACCAATGTACTGGTCAATAACGGTGAAACTGTTATTTTAGGAGGAGT
ATTTGAGCAGACAACTTCTAACTCACAAACCAAGGTTCCTTTCTTTGGAGACATTCCTGTAGTTGGGCGTTTATTTAGAA
AAGATGTGAAATCTGATGATAAGCAAGAGTTATTGATTTTCGTTACGCCACGAATTGTTAATGACACTTTGGTGAGAAAT
CATTAA

Domains

Predicted by InterproScan.

• Bacterial type II and III secretion system protein (Secretin) (555-713)

• Secretin and TonB N terminus short domain (STN) (291-333)

• AMIN domain (AMIN) (39-118)

• Bacterial type II/III secretion system short domain (Secretin_N) (360-455)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Acinetobacter baumannii D1279779	92.233	100	0.922
pilQ	Acinetobacter baumannii strain A118	92.094	100	0.921
comQ	Acinetobacter baylyi ADP1	74.274	100	0.745
pilQ	Pseudomonas aeruginosa PAK	38.963	100	0.406