Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | OTEC02_RS01525 | Genome accession | NZ_CP020015 |
| Coordinates | 315875..316402 (+) | Length | 175 a.a. |
| NCBI ID | WP_081172660.1 | Uniprot ID | - |
| Organism | Acinetobacter lactucae strain OTEC-02 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 310875..321402
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OTEC02_RS01510 (OTEC02_01510) | comM | 313388..314446 (+) | 1059 | WP_057104815.1 | pilus assembly protein PilM | Machinery gene |
| OTEC02_RS01515 (OTEC02_01515) | pilN | 314446..315087 (+) | 642 | WP_031949513.1 | PilN domain-containing protein | Machinery gene |
| OTEC02_RS01520 (OTEC02_01520) | pilO | 315084..315863 (+) | 780 | WP_081172659.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| OTEC02_RS01525 (OTEC02_01525) | pilP | 315875..316402 (+) | 528 | WP_081172660.1 | pilus assembly protein PilP | Machinery gene |
| OTEC02_RS01530 (OTEC02_01530) | pilQ | 316465..318630 (+) | 2166 | WP_081172661.1 | type IV pilus secretin PilQ | Machinery gene |
| OTEC02_RS01535 (OTEC02_01535) | aroK | 318642..319211 (+) | 570 | WP_081172662.1 | shikimate kinase AroK | - |
| OTEC02_RS01540 (OTEC02_01540) | aroB | 319240..320322 (+) | 1083 | WP_061875201.1 | 3-dehydroquinate synthase | - |
| OTEC02_RS01545 (OTEC02_01545) | - | 320339..321220 (+) | 882 | WP_081172663.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19325.53 Da Isoelectric Point: 9.7301
>NTDB_id=220074 OTEC02_RS01525 WP_081172660.1 315875..316402(+) (pilP) [Acinetobacter lactucae strain OTEC-02]
MKLKKILLSLGMGLVLVGCDSRIDAVNQQMADMRNQPPQAIEPAPVFTPVPQFNYAAHQLKSPFLPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALESLNMKGSMRNNRGQVMALIQTPDHQIERVQVGNYIGMNQGRITHIGPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
MKLKKILLSLGMGLVLVGCDSRIDAVNQQMADMRNQPPQAIEPAPVFTPVPQFNYAAHQLKSPFLPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALESLNMKGSMRNNRGQVMALIQTPDHQIERVQVGNYIGMNQGRITHIGPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=220074 OTEC02_RS01525 WP_081172660.1 315875..316402(+) (pilP) [Acinetobacter lactucae strain OTEC-02]
ATGAAATTAAAGAAAATTTTACTTTCTCTGGGGATGGGCTTGGTTTTAGTCGGATGCGACTCGAGAATTGATGCCGTAAA
TCAGCAAATGGCCGACATGCGTAATCAGCCACCGCAAGCTATAGAGCCAGCGCCTGTTTTTACACCTGTCCCACAGTTTA
ATTATGCAGCCCATCAGTTAAAGAGCCCATTTTTACCAAGCTCGCTTGCTGCTGAACTCAAGATTATGGCGGGAAAACGG
GTATATCCGAATTTCTCACGAGCACCTCAACCCCTCGAAAGCTATGCATTAGAATCCTTAAATATGAAAGGCAGCATGCG
TAACAACCGTGGGCAAGTCATGGCTCTTATTCAAACACCTGATCATCAAATTGAGCGAGTACAGGTCGGGAACTATATCG
GGATGAATCAAGGTCGAATTACCCATATTGGTCCGACTCAGATTGATCTGGTGGAAATTGTCCCTGATGGACGAGAAGGC
TATGTGGAAAGACCAAGAACCTTGGTGTTGATTGGACCTGCACCCTAA
ATGAAATTAAAGAAAATTTTACTTTCTCTGGGGATGGGCTTGGTTTTAGTCGGATGCGACTCGAGAATTGATGCCGTAAA
TCAGCAAATGGCCGACATGCGTAATCAGCCACCGCAAGCTATAGAGCCAGCGCCTGTTTTTACACCTGTCCCACAGTTTA
ATTATGCAGCCCATCAGTTAAAGAGCCCATTTTTACCAAGCTCGCTTGCTGCTGAACTCAAGATTATGGCGGGAAAACGG
GTATATCCGAATTTCTCACGAGCACCTCAACCCCTCGAAAGCTATGCATTAGAATCCTTAAATATGAAAGGCAGCATGCG
TAACAACCGTGGGCAAGTCATGGCTCTTATTCAAACACCTGATCATCAAATTGAGCGAGTACAGGTCGGGAACTATATCG
GGATGAATCAAGGTCGAATTACCCATATTGGTCCGACTCAGATTGATCTGGTGGAAATTGTCCCTGATGGACGAGAAGGC
TATGTGGAAAGACCAAGAACCTTGGTGTTGATTGGACCTGCACCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
87.429 |
100 |
0.874 |
| comL | Acinetobacter baylyi ADP1 |
73.373 |
96.571 |
0.709 |