Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | BV131_RS01785 | Genome accession | NZ_CP020010 |
| Coordinates | 369862..370311 (-) | Length | 149 a.a. |
| NCBI ID | WP_042601842.1 | Uniprot ID | Q5D8C1 |
| Organism | Haemophilus influenzae strain 67P38H1 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 364862..375311
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BV131_RS01765 (BV131_363) | rho | 365246..366508 (+) | 1263 | WP_005666690.1 | transcription termination factor Rho | - |
| BV131_RS01770 (BV131_364) | pilD | 366562..367254 (-) | 693 | WP_050822711.1 | prepilin peptidase | Machinery gene |
| BV131_RS01775 (BV131_365) | pilC | 367251..368471 (-) | 1221 | WP_042601844.1 | type II secretion system F family protein | Machinery gene |
| BV131_RS01780 (BV131_366) | pilB | 368468..369865 (-) | 1398 | WP_042601843.1 | GspE/PulE family protein | Machinery gene |
| BV131_RS01785 | pilA | 369862..370311 (-) | 450 | WP_042601842.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| BV131_RS01790 (BV131_368) | ampD | 370426..370986 (+) | 561 | WP_005648974.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| BV131_RS01795 (BV131_370) | corC | 371609..372508 (+) | 900 | WP_011961742.1 | CNNM family magnesium/cobalt transport protein CorC | - |
| BV131_RS01800 (BV131_371) | lnt | 372531..374060 (+) | 1530 | WP_080358502.1 | apolipoprotein N-acyltransferase | - |
| BV131_RS01805 (BV131_372) | rsmE | 374110..374847 (+) | 738 | WP_050822717.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 15400.70 Da Isoelectric Point: 8.4623
>NTDB_id=219895 BV131_RS01785 WP_042601842.1 369862..370311(-) (pilA) [Haemophilus influenzae strain 67P38H1]
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKADVELCVYSTGKPSSCSGGSNGIA
ADITTAKGYVKSVTTSNGAITVKGDGTLANMEYILQASGNAATGVTWTTTCKGTDASLFPANFCGSVTQ
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKADVELCVYSTGKPSSCSGGSNGIA
ADITTAKGYVKSVTTSNGAITVKGDGTLANMEYILQASGNAATGVTWTTTCKGTDASLFPANFCGSVTQ
Nucleotide
Download Length: 450 bp
>NTDB_id=219895 BV131_RS01785 WP_042601842.1 369862..370311(-) (pilA) [Haemophilus influenzae strain 67P38H1]
ATGAAACTAACAACACAGCAAACCTTGAAAAAAGGGTTTACATTAATAGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACTATCGCAATTCCCTCTTATCAAAATTATACTAAAAAAGCGGCGGTATCTGAATTACTGCAAGCGTCAGCGC
CTTATAAGGCTGATGTGGAATTATGTGTATATAGTACAGGTAAACCTTCCAGTTGCTCGGGAGGAAGCAATGGAATTGCG
GCTGATATTACAACAGCAAAAGGCTATGTAAAATCAGTGACAACAAGCAACGGTGCAATAACAGTAAAAGGGGATGGCAC
ATTGGCAAATATGGAATATATTTTGCAAGCCAGTGGTAATGCTGCAACAGGTGTAACTTGGACAACAACTTGCAAAGGAA
CGGATGCCTCTTTATTTCCAGCAAATTTTTGCGGAAGTGTCACACAATGA
ATGAAACTAACAACACAGCAAACCTTGAAAAAAGGGTTTACATTAATAGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACTATCGCAATTCCCTCTTATCAAAATTATACTAAAAAAGCGGCGGTATCTGAATTACTGCAAGCGTCAGCGC
CTTATAAGGCTGATGTGGAATTATGTGTATATAGTACAGGTAAACCTTCCAGTTGCTCGGGAGGAAGCAATGGAATTGCG
GCTGATATTACAACAGCAAAAGGCTATGTAAAATCAGTGACAACAAGCAACGGTGCAATAACAGTAAAAGGGGATGGCAC
ATTGGCAAATATGGAATATATTTTGCAAGCCAGTGGTAATGCTGCAACAGGTGTAACTTGGACAACAACTTGCAAAGGAA
CGGATGCCTCTTTATTTCCAGCAAATTTTTGCGGAAGTGTCACACAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
94.631 |
100 |
0.946 |
| pilA | Haemophilus influenzae Rd KW20 |
88.591 |
100 |
0.886 |
| pilA | Glaesserella parasuis strain SC1401 |
56.376 |
100 |
0.564 |
| pilA2 | Legionella pneumophila str. Paris |
39.189 |
99.329 |
0.389 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
39.189 |
99.329 |
0.389 |
| comP | Acinetobacter baylyi ADP1 |
42.52 |
85.235 |
0.362 |
| pilA | Vibrio campbellii strain DS40M4 |
38.298 |
94.631 |
0.362 |