Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   BWQ98_RS04830 Genome accession   NZ_CP019299
Coordinates   905103..905753 (+) Length   216 a.a.
NCBI ID   WP_050210310.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain HKU1-14     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 900103..910753
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWQ98_RS04790 (BWQ98_04795) - 900599..900814 (+) 216 WP_001232081.1 YozE family protein -
  BWQ98_RS04795 (BWQ98_04800) - 900900..901868 (+) 969 WP_000658183.1 PhoH family protein -
  BWQ98_RS04800 (BWQ98_04805) - 902048..902548 (+) 501 WP_000566988.1 GNAT family N-acetyltransferase -
  BWQ98_RS04805 (BWQ98_04810) - 902551..902877 (+) 327 Protein_910 TfoX/Sxy family protein -
  BWQ98_RS11490 ald 903178..904289 (-) 1112 Protein_911 alanine dehydrogenase -
  BWQ98_RS04825 (BWQ98_04830) - 904466..905035 (+) 570 WP_000443775.1 GNAT family N-acetyltransferase -
  BWQ98_RS04830 (BWQ98_04835) comEA/celA/cilE 905103..905753 (+) 651 WP_050210310.1 helix-hairpin-helix domain-containing protein Machinery gene
  BWQ98_RS04835 (BWQ98_04840) comEC/celB 905737..907977 (+) 2241 WP_127245045.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  BWQ98_RS04840 (BWQ98_04845) - 908156..908344 (+) 189 WP_050210312.1 hypothetical protein -
  BWQ98_RS04845 (BWQ98_04850) - 908376..908963 (+) 588 WP_050210313.1 ABC transporter ATP-binding protein -
  BWQ98_RS04850 (BWQ98_04855) - 908967..910148 (+) 1182 WP_000655935.1 membrane protein -

Sequence


Protein


Download         Length: 216 a.a.        Molecular weight: 23251.61 Da        Isoelectric Point: 5.5171

>NTDB_id=214684 BWQ98_RS04830 WP_050210310.1 905103..905753(+) (comEA/celA/cilE) [Streptococcus pneumoniae strain HKU1-14]
MEAIIEKIKEYKIIVICTGLGLLVGGFFLLKPAPQTPVKETNLQAEVAAVSKDLVSEKEVNKEEKEEPVEQDLITVDVKG
AVKSPGIYDLLVGSRVNDAVQKAGGLTEQADSKSLNLAQKVSDEALVYVPTKGEEAVSQQTGSGTASSTSKEKKVNLNKA
SLEELKQVKGLGGKRAQDIIDHREANGKFKSIDELKKVSGIGTKTIEKLKDYVTVD

Nucleotide


Download         Length: 651 bp        

>NTDB_id=214684 BWQ98_RS04830 WP_050210310.1 905103..905753(+) (comEA/celA/cilE) [Streptococcus pneumoniae strain HKU1-14]
ATGGAAGCAATTATCGAGAAAATCAAAGAGTATAAAATCATCGTCATCTGTACTGGTCTGGGCTTGCTTGTAGGCGGATT
TTTCCTGCTAAAGCCAGCTCCACAAACACCTGTCAAAGAAACGAATTTGCAGGCTGAAGTTGCAGCTGTTTCCAAGGATT
TGGTATCCGAAAAGGAAGTGAACAAGGAAGAGAAGGAAGAACCAGTTGAACAAGATCTAATCACAGTAGATGTCAAAGGT
GCTGTCAAATCGCCAGGGATTTATGACTTGCTTGTAGGTAGTCGAGTCAATGATGCTGTTCAGAAGGCTGGTGGCTTGAC
AGAGCAAGCAGACAGCAAGTCGCTCAATCTAGCTCAGAAAGTTAGTGATGAGGCTCTGGTTTACGTTCCTACTAAGGGAG
AAGAAGCAGTTAGTCAACAGACTGGTTCGGGGACAGCTTCTTCAACAAGCAAGGAAAAGAAGGTCAATCTCAACAAGGCC
AGTCTGGAAGAGCTTAAACAGGTTAAGGGACTGGGAGGAAAACGAGCTCAGGACATTATAGACCATCGTGAGGCAAATGG
GAAATTCAAGTCGATTGATGAACTCAAGAAGGTCTCTGGCATTGGTACTAAGACCATAGAAAAGCTAAAAGACTATGTTA
CAGTGGATTAA

Domains


Predicted by InterproScan.

(76-126)

(151-214)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus pneumoniae Rx1

97.222

100

0.972

  comEA/celA/cilE Streptococcus pneumoniae D39

97.222

100

0.972

  comEA/celA/cilE Streptococcus pneumoniae R6

97.222

100

0.972

  comEA/celA/cilE Streptococcus pneumoniae TIGR4

96.296

100

0.963

  comEA/celA/cilE Streptococcus mitis NCTC 12261

95.37

100

0.954

  comEA/celA/cilE Streptococcus mitis SK321

91.204

100

0.912

  comEA Lactococcus lactis subsp. cremoris KW2

44.053

100

0.463

  comEA Latilactobacillus sakei subsp. sakei 23K

34.335

100

0.37

  comEA Bacillus subtilis subsp. subtilis str. 168

42.105

87.963

0.37


Multiple sequence alignment