Detailed information
Bioinformatically predicted
Overview
| Name | comR | Type | Regulator |
| Locus tag | BTR42_RS00700 | Genome accession | NZ_CP018822 |
| Coordinates | 102999..103901 (+) | Length | 300 a.a. |
| NCBI ID | WP_077495929.1 | Uniprot ID | - |
| Organism | Streptococcus gallolyticus subsp. gallolyticus DSM 16831 | ||
| Function | activate transcription of comX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 97999..108901
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BTR42_RS00660 (BTR42_00425) | comYF | 98093..98560 (+) | 468 | WP_012961330.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| BTR42_RS00665 (BTR42_00430) | comGG | 98514..98864 (+) | 351 | WP_420031090.1 | competence type IV pilus minor pilin ComGG | - |
| BTR42_RS00670 (BTR42_00435) | comYH | 98919..99875 (+) | 957 | WP_009853236.1 | class I SAM-dependent methyltransferase | Machinery gene |
| BTR42_RS00675 (BTR42_00440) | - | 99928..101127 (+) | 1200 | WP_061458770.1 | acetate kinase | - |
| BTR42_RS00680 (BTR42_00445) | - | 101289..101489 (+) | 201 | WP_012961332.1 | helix-turn-helix transcriptional regulator | - |
| BTR42_RS00690 (BTR42_00455) | - | 101721..102173 (+) | 453 | WP_061458772.1 | hypothetical protein | - |
| BTR42_RS00695 (BTR42_00460) | - | 102185..102820 (+) | 636 | WP_077495927.1 | CPBP family intramembrane glutamic endopeptidase | - |
| BTR42_RS00700 (BTR42_00465) | comR | 102999..103901 (+) | 903 | WP_077495929.1 | helix-turn-helix domain-containing protein | Regulator |
| BTR42_RS00705 (BTR42_00470) | purD | 104358..105620 (+) | 1263 | WP_009853192.1 | phosphoribosylamine--glycine ligase | - |
| BTR42_RS00710 (BTR42_00475) | - | 105610..106059 (+) | 450 | WP_012961319.1 | DUF523 domain-containing protein | - |
| BTR42_RS00715 (BTR42_00480) | purE | 106059..106547 (+) | 489 | WP_061458775.1 | 5-(carboxyamino)imidazole ribonucleotide mutase | - |
| BTR42_RS00720 (BTR42_00485) | purK | 106534..107625 (+) | 1092 | WP_077495931.1 | 5-(carboxyamino)imidazole ribonucleotide synthase | - |
| BTR42_RS00725 (BTR42_00490) | - | 107645..107869 (+) | 225 | WP_061458915.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 300 a.a. Molecular weight: 35172.13 Da Isoelectric Point: 4.7562
>NTDB_id=210610 BTR42_RS00700 WP_077495929.1 102999..103901(+) (comR) [Streptococcus gallolyticus subsp. gallolyticus DSM 16831]
MEKFGIKVRALREEKGISREEFCGDETELSVRQLARIESNQSIPSLSKAQFIANQLGVTLGTMTDGDSLELPRRYEELKY
LLIRTPTYGDKVRLGRKGEYFDEISEKFYDIIPEEERLIIDCLQAKLDVHFSDDVNFGEGILNDYFDQVNRKQLFNINDL
ILIDLYFICLESAKTTEGIYSITFYDKLMKRLINQKRISPETDLILNNVLLNNIDLAFKYGRENYVERVIEISNSIMTEI
HDFQRRPILSLVEWKYYLKFKHDFVAAEQSFTNATLFARLVGDTYLENKLKEEWKLDTTT
MEKFGIKVRALREEKGISREEFCGDETELSVRQLARIESNQSIPSLSKAQFIANQLGVTLGTMTDGDSLELPRRYEELKY
LLIRTPTYGDKVRLGRKGEYFDEISEKFYDIIPEEERLIIDCLQAKLDVHFSDDVNFGEGILNDYFDQVNRKQLFNINDL
ILIDLYFICLESAKTTEGIYSITFYDKLMKRLINQKRISPETDLILNNVLLNNIDLAFKYGRENYVERVIEISNSIMTEI
HDFQRRPILSLVEWKYYLKFKHDFVAAEQSFTNATLFARLVGDTYLENKLKEEWKLDTTT
Nucleotide
Download Length: 903 bp
>NTDB_id=210610 BTR42_RS00700 WP_077495929.1 102999..103901(+) (comR) [Streptococcus gallolyticus subsp. gallolyticus DSM 16831]
TTGGAAAAGTTTGGGATTAAAGTACGTGCATTAAGAGAGGAAAAGGGAATTTCACGTGAGGAATTCTGTGGTGATGAAAC
AGAATTGTCTGTGAGACAGCTAGCTAGAATTGAGTCCAATCAGTCAATTCCTAGCCTAAGTAAAGCCCAATTCATTGCCA
ATCAACTTGGTGTTACCTTGGGTACAATGACGGATGGTGATAGCTTGGAATTGCCTAGACGGTATGAAGAGTTAAAGTAT
CTTTTGATTCGTACGCCGACATATGGGGATAAAGTTAGACTGGGACGTAAGGGAGAATACTTTGATGAAATTTCAGAGAA
ATTTTATGATATTATTCCCGAAGAAGAAAGATTAATCATTGATTGCTTACAGGCTAAACTGGATGTCCATTTTAGTGATG
ATGTTAATTTTGGTGAAGGAATTTTAAATGATTATTTTGACCAAGTTAACCGAAAACAATTGTTTAACATTAATGATTTG
ATTTTGATTGACCTCTATTTTATTTGTTTGGAATCGGCTAAGACAACTGAAGGAATTTATAGTATAACTTTTTACGATAA
ACTGATGAAGAGACTAATCAATCAAAAACGTATTTCGCCAGAAACCGATTTGATTTTAAATAATGTGTTGTTAAATAATA
TTGATTTAGCATTTAAATATGGACGAGAAAATTATGTTGAACGTGTTATTGAAATCAGTAATAGTATTATGACAGAAATT
CATGACTTCCAGCGTCGCCCAATTTTAAGTCTGGTAGAGTGGAAGTATTATTTAAAGTTTAAACATGATTTTGTTGCAGC
AGAACAGTCTTTTACAAATGCAACATTATTTGCAAGATTAGTTGGCGATACCTATTTAGAAAATAAGTTGAAAGAAGAAT
GGAAATTGGATACAACAACATGA
TTGGAAAAGTTTGGGATTAAAGTACGTGCATTAAGAGAGGAAAAGGGAATTTCACGTGAGGAATTCTGTGGTGATGAAAC
AGAATTGTCTGTGAGACAGCTAGCTAGAATTGAGTCCAATCAGTCAATTCCTAGCCTAAGTAAAGCCCAATTCATTGCCA
ATCAACTTGGTGTTACCTTGGGTACAATGACGGATGGTGATAGCTTGGAATTGCCTAGACGGTATGAAGAGTTAAAGTAT
CTTTTGATTCGTACGCCGACATATGGGGATAAAGTTAGACTGGGACGTAAGGGAGAATACTTTGATGAAATTTCAGAGAA
ATTTTATGATATTATTCCCGAAGAAGAAAGATTAATCATTGATTGCTTACAGGCTAAACTGGATGTCCATTTTAGTGATG
ATGTTAATTTTGGTGAAGGAATTTTAAATGATTATTTTGACCAAGTTAACCGAAAACAATTGTTTAACATTAATGATTTG
ATTTTGATTGACCTCTATTTTATTTGTTTGGAATCGGCTAAGACAACTGAAGGAATTTATAGTATAACTTTTTACGATAA
ACTGATGAAGAGACTAATCAATCAAAAACGTATTTCGCCAGAAACCGATTTGATTTTAAATAATGTGTTGTTAAATAATA
TTGATTTAGCATTTAAATATGGACGAGAAAATTATGTTGAACGTGTTATTGAAATCAGTAATAGTATTATGACAGAAATT
CATGACTTCCAGCGTCGCCCAATTTTAAGTCTGGTAGAGTGGAAGTATTATTTAAAGTTTAAACATGATTTTGTTGCAGC
AGAACAGTCTTTTACAAATGCAACATTATTTGCAAGATTAGTTGGCGATACCTATTTAGAAAATAAGTTGAAAGAAGAAT
GGAAATTGGATACAACAACATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comR | Streptococcus infantarius subsp. infantarius ATCC BAA-102 |
83.624 |
95.667 |
0.8 |
| comR | Streptococcus mutans UA159 |
51.839 |
99.667 |
0.517 |
| comR | Streptococcus pyogenes MGAS8232 |
50.993 |
100 |
0.513 |
| comR | Streptococcus pyogenes MGAS315 |
45.973 |
99.333 |
0.457 |
| comR | Streptococcus suis P1/7 |
37.667 |
100 |
0.377 |
| comR | Streptococcus suis 05ZYH33 |
37.667 |
100 |
0.377 |
| comR | Streptococcus suis D9 |
36.333 |
100 |
0.363 |