Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | BTR42_RS00670 | Genome accession | NZ_CP018822 |
| Coordinates | 98919..99875 (+) | Length | 318 a.a. |
| NCBI ID | WP_009853236.1 | Uniprot ID | A0A139R3Z2 |
| Organism | Streptococcus gallolyticus subsp. gallolyticus DSM 16831 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 93919..104875
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BTR42_RS00630 (BTR42_00395) | - | 94837..95205 (+) | 369 | WP_074658936.1 | DUF1033 family protein | - |
| BTR42_RS00635 (BTR42_00400) | comYA | 95276..96217 (+) | 942 | WP_077495921.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BTR42_RS00640 (BTR42_00405) | comYB | 96099..97184 (+) | 1086 | WP_231873059.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| BTR42_RS00645 (BTR42_00410) | comYC | 97184..97477 (+) | 294 | WP_039695588.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| BTR42_RS00650 (BTR42_00415) | comYD | 97461..97892 (+) | 432 | WP_009853232.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| BTR42_RS00655 (BTR42_00420) | comGE | 97846..98139 (+) | 294 | WP_012961329.1 | competence type IV pilus minor pilin ComGE | - |
| BTR42_RS00660 (BTR42_00425) | comYF | 98093..98560 (+) | 468 | WP_012961330.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| BTR42_RS00665 (BTR42_00430) | comGG | 98514..98864 (+) | 351 | WP_420031090.1 | competence type IV pilus minor pilin ComGG | - |
| BTR42_RS00670 (BTR42_00435) | comYH | 98919..99875 (+) | 957 | WP_009853236.1 | class I SAM-dependent methyltransferase | Machinery gene |
| BTR42_RS00675 (BTR42_00440) | - | 99928..101127 (+) | 1200 | WP_061458770.1 | acetate kinase | - |
| BTR42_RS00680 (BTR42_00445) | - | 101289..101489 (+) | 201 | WP_012961332.1 | helix-turn-helix transcriptional regulator | - |
| BTR42_RS00690 (BTR42_00455) | - | 101721..102173 (+) | 453 | WP_061458772.1 | hypothetical protein | - |
| BTR42_RS00695 (BTR42_00460) | - | 102185..102820 (+) | 636 | WP_077495927.1 | CPBP family intramembrane glutamic endopeptidase | - |
| BTR42_RS00700 (BTR42_00465) | comR | 102999..103901 (+) | 903 | WP_077495929.1 | helix-turn-helix domain-containing protein | Regulator |
Sequence
Protein
Download Length: 318 a.a. Molecular weight: 36027.96 Da Isoelectric Point: 4.4127
>NTDB_id=210608 BTR42_RS00670 WP_009853236.1 98919..99875(+) (comYH) [Streptococcus gallolyticus subsp. gallolyticus DSM 16831]
MNFEKIETAYELILENIQLIENELKTHIYDALIEQNSFYLGAEGASEEVAANNEKLRQLALTKEEWRRAFQFIFIKAGQT
EQLQANHQFTPDAIGFILLFLIENLTDSDKIDLLEIGSGTGNLAQTLLNNSSKELNYLGIEVDDLLIDLSASIAEVMDSD
AQFIQEDAVRPQILKESDVIISDLPVGFYPNDDIAKRYKVASSDEHTYAHHLLMEQSLKYLKKDGIAVFLAPVSLLTSKQ
SDLLKQWLKDYADIIAVITLPESIFGNAANAKSIFVLKKQAAHTPETFVYPLSDLQSREALTDFIRKFQKWKVDNMNF
MNFEKIETAYELILENIQLIENELKTHIYDALIEQNSFYLGAEGASEEVAANNEKLRQLALTKEEWRRAFQFIFIKAGQT
EQLQANHQFTPDAIGFILLFLIENLTDSDKIDLLEIGSGTGNLAQTLLNNSSKELNYLGIEVDDLLIDLSASIAEVMDSD
AQFIQEDAVRPQILKESDVIISDLPVGFYPNDDIAKRYKVASSDEHTYAHHLLMEQSLKYLKKDGIAVFLAPVSLLTSKQ
SDLLKQWLKDYADIIAVITLPESIFGNAANAKSIFVLKKQAAHTPETFVYPLSDLQSREALTDFIRKFQKWKVDNMNF
Nucleotide
Download Length: 957 bp
>NTDB_id=210608 BTR42_RS00670 WP_009853236.1 98919..99875(+) (comYH) [Streptococcus gallolyticus subsp. gallolyticus DSM 16831]
ATGAATTTTGAAAAAATTGAAACAGCCTATGAGCTGATTTTAGAAAATATCCAATTAATTGAAAATGAGTTAAAAACTCA
TATTTATGATGCGCTTATTGAACAGAATTCTTTTTACTTGGGGGCTGAAGGTGCCAGTGAAGAAGTTGCTGCCAACAATG
AGAAACTGCGTCAGCTTGCATTGACCAAAGAAGAGTGGCGTCGAGCTTTCCAATTTATCTTTATCAAAGCTGGTCAAACA
GAGCAGCTGCAAGCCAATCATCAATTTACACCAGATGCTATTGGTTTTATTTTGCTGTTCTTGATTGAAAATCTGACAGA
TTCAGATAAAATTGATCTTTTAGAAATTGGTAGTGGGACAGGAAACCTTGCTCAAACATTGTTAAATAATTCGTCTAAAG
AATTAAATTATCTTGGTATTGAAGTTGACGATTTGTTGATTGATTTATCAGCCAGTATTGCAGAAGTGATGGATTCTGAT
GCTCAGTTTATTCAAGAAGATGCTGTACGTCCACAAATTCTGAAAGAAAGTGATGTGATTATTAGTGATTTGCCAGTTGG
TTTTTATCCTAATGATGACATTGCCAAACGTTATAAAGTGGCAAGTTCTGATGAGCATACCTATGCCCATCATTTGTTAA
TGGAACAATCGTTAAAATATCTCAAAAAAGATGGTATTGCAGTCTTTTTGGCGCCTGTCAGTCTTTTGACAAGTAAGCAA
AGTGATTTATTGAAACAATGGTTGAAAGATTACGCGGATATTATCGCCGTGATTACCTTGCCAGAATCTATTTTTGGTAA
TGCAGCGAATGCAAAATCAATTTTTGTTTTGAAAAAACAGGCTGCGCATACGCCAGAAACCTTTGTTTATCCACTTTCTG
ACTTACAAAGTCGTGAAGCTCTGACTGATTTCATTAGAAAATTTCAAAAATGGAAAGTTGATAATATGAATTTTTAA
ATGAATTTTGAAAAAATTGAAACAGCCTATGAGCTGATTTTAGAAAATATCCAATTAATTGAAAATGAGTTAAAAACTCA
TATTTATGATGCGCTTATTGAACAGAATTCTTTTTACTTGGGGGCTGAAGGTGCCAGTGAAGAAGTTGCTGCCAACAATG
AGAAACTGCGTCAGCTTGCATTGACCAAAGAAGAGTGGCGTCGAGCTTTCCAATTTATCTTTATCAAAGCTGGTCAAACA
GAGCAGCTGCAAGCCAATCATCAATTTACACCAGATGCTATTGGTTTTATTTTGCTGTTCTTGATTGAAAATCTGACAGA
TTCAGATAAAATTGATCTTTTAGAAATTGGTAGTGGGACAGGAAACCTTGCTCAAACATTGTTAAATAATTCGTCTAAAG
AATTAAATTATCTTGGTATTGAAGTTGACGATTTGTTGATTGATTTATCAGCCAGTATTGCAGAAGTGATGGATTCTGAT
GCTCAGTTTATTCAAGAAGATGCTGTACGTCCACAAATTCTGAAAGAAAGTGATGTGATTATTAGTGATTTGCCAGTTGG
TTTTTATCCTAATGATGACATTGCCAAACGTTATAAAGTGGCAAGTTCTGATGAGCATACCTATGCCCATCATTTGTTAA
TGGAACAATCGTTAAAATATCTCAAAAAAGATGGTATTGCAGTCTTTTTGGCGCCTGTCAGTCTTTTGACAAGTAAGCAA
AGTGATTTATTGAAACAATGGTTGAAAGATTACGCGGATATTATCGCCGTGATTACCTTGCCAGAATCTATTTTTGGTAA
TGCAGCGAATGCAAAATCAATTTTTGTTTTGAAAAAACAGGCTGCGCATACGCCAGAAACCTTTGTTTATCCACTTTCTG
ACTTACAAAGTCGTGAAGCTCTGACTGATTTCATTAGAAAATTTCAAAAATGGAAAGTTGATAATATGAATTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
68.987 |
99.371 |
0.686 |
| comYH | Streptococcus mutans UA159 |
68.671 |
99.371 |
0.682 |