Detailed information NTG0206093

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: BMJ42_RS11045
• Genome accession: NZ_CP018136
• Coordinates: 1983675..1984079 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588023.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain SP49
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1978675..1989079

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BMJ42_RS11005 (BMJ42_02087)	rnpA	1979089..1979460 (-)	372	WP_000739244.1	ribonuclease P protein component	-
BMJ42_RS13655	-	1979477..1979608 (-)	132	WP_000768904.1	hypothetical protein	-
BMJ42_RS11010 (BMJ42_02088)	-	1979609..1980799 (-)	1191	WP_000167752.1	acetate kinase	-
BMJ42_RS11015 (BMJ42_02089)	comYH	1980850..1981803 (-)	954	WP_000345126.1	class I SAM-dependent methyltransferase	Machinery gene
BMJ42_RS12455	-	1981864..1982458 (-)	595	Protein_2032	class I SAM-dependent methyltransferase	-
BMJ42_RS11030 (BMJ42_02092)	comGG/cglG	1982595..1983008 (-)	414	WP_000265620.1	competence type IV pilus minor pilin ComGG	Machinery gene
BMJ42_RS11035 (BMJ42_02093)	comGF/cglF	1982986..1983447 (-)	462	WP_000250540.1	competence type IV pilus minor pilin ComGF	Machinery gene
BMJ42_RS11040 (BMJ42_02094)	comGE/cglE	1983410..1983712 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
BMJ42_RS11045 (BMJ42_02095)	comGD/cglD	1983675..1984079 (-)	405	WP_000588023.1	competence type IV pilus minor pilin ComGD	Machinery gene
BMJ42_RS11050 (BMJ42_02096)	comGC/cglC	1984072..1984398 (-)	327	WP_000738630.1	comG operon protein ComGC	Machinery gene
BMJ42_RS11055 (BMJ42_02097)	comGB/cglB	1984400..1985416 (-)	1017	WP_073177425.1	competence type IV pilus assembly protein ComGB	Machinery gene
BMJ42_RS11060 (BMJ42_02098)	comGA/cglA/cilD	1985364..1986305 (-)	942	WP_000249559.1	competence type IV pilus ATPase ComGA	Machinery gene
BMJ42_RS11065 (BMJ42_02099)	-	1986381..1986746 (-)	366	WP_000286415.1	DUF1033 family protein	-
BMJ42_RS11070 (BMJ42_02100)	-	1987013..1988268 (+)	1256	WP_370657740.1	ISL3 family transposase	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14638.82 Da
• Isoelectric Point: 10.2164

>NTDB_id=206093 BMJ42_RS11045 WP_000588023.1 1983675..1984079(-) (comGD/cglD) [Streptococcus pneumoniae strain SP49]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=206093 BMJ42_RS11045 WP_000588023.1 1983675..1984079(-) (comGD/cglD) [Streptococcus pneumoniae strain SP49]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	98.507	100	0.985
comGD/cglD	Streptococcus pneumoniae Rx1	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae D39	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae R6	97.761	100	0.978
comGD/cglD	Streptococcus mitis SK321	97.015	100	0.97
comGD/cglD	Streptococcus mitis NCTC 12261	97.744	99.254	0.97
comYD	Streptococcus gordonii str. Challis substr. CH1	58.268	94.776	0.552
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47