Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   Spy49_0914 Genome accession   CP000829
Coordinates   910085..910921 (+) Length   278 a.a.
NCBI ID   ACI61220.1    Uniprot ID   -
Organism   Streptococcus pyogenes NZ131     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 905085..915921
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Spy49_0908 - 905603..906007 (+) 405 ACI61214.1 hypothetical protein -
  Spy49_0909c - 906057..906968 (-) 912 ACI61215.1 hypothetical protein -
  Spy49_0910c hlyIII 907220..907735 (-) 516 ACI61216.1 Putative hemolysin III -
  Spy49_0911c - 907732..908172 (-) 441 ACI61217.1 hypothetical protein -
  Spy49_0912 - 908391..909239 (+) 849 ACI61218.1 GTP-binding protein -
  Spy49_0913 rnh 909229..910020 (+) 792 ACI61219.1 Ribonuclease HII -
  Spy49_0914 dprA 910085..910921 (+) 837 ACI61220.1 Putative DNA processing protein Machinery gene
  Spy49_0915 topA 911028..913157 (+) 2130 ACI61221.1 Putative DNA topoisomerase I -
  Spy49_0916c - 913233..913715 (-) 483 ACI61222.1 Transcriptional regulator, LysR family -
  Spy49_0917c - 913722..913844 (-) 123 ACI61223.1 Transcriptional regulator, LysR family -
  Spy49_0918 - 914130..914696 (+) 567 ACI61224.1 Regulatory protein -
  Spy49_0919 - 914711..915703 (+) 993 ACI61225.1 D-lactate dehydrogenase -

Sequence


Protein


Download         Length: 278 a.a.        Molecular weight: 30987.06 Da        Isoelectric Point: 9.5635

>NTDB_id=20147 Spy49_0914 ACI61220.1 910085..910921(+) (dprA) [Streptococcus pyogenes NZ131]
MNHFELYKLKKAGLTNKNILNILDYQKHQEKSLSLRDMAVVSGCKHPSHFIEAYKQLDIQKLKMEFKQFPSISILDKHYP
MALKEIYNPPVLLFFQGNLDLLEKPKLAIVGSRRSSDTGVKSVRKILKELGNRFVIVSGLARGIDTSAHLACLKNGGQTI
AIIGTGLDRFYPKENRKLQTFLGKNHLVITEYGPGEEALSYHFPERNRIIAGLSRGILVVEAKNRSGSLITCQIGIEEGR
DIFAVPGNILDGKSEGCLQLIKEGATCVTSGMDILSEY

Nucleotide


Download         Length: 837 bp        

>NTDB_id=20147 Spy49_0914 ACI61220.1 910085..910921(+) (dprA) [Streptococcus pyogenes NZ131]
GTGAATCATTTTGAACTTTATAAGCTAAAGAAAGCTGGACTGACTAATAAAAACATTCTCAATATTCTTGACTACCAAAA
ACACCAGGAAAAATCGTTGTCACTTCGAGATATGGCCGTTGTTTCTGGCTGTAAGCATCCGTCTCACTTTATAGAAGCCT
ATAAGCAGTTAGATATTCAAAAATTAAAAATGGAATTTAAACAATTTCCTAGTATTTCTATCTTAGATAAGCATTACCCA
ATGGCATTGAAAGAAATATACAATCCACCTGTCCTCTTGTTTTTTCAGGGAAATTTAGACCTTCTTGAGAAACCTAAATT
AGCCATTGTCGGCTCCAGACGCTCAAGCGATACCGGAGTAAAGTCTGTCCGTAAAATTCTTAAAGAACTCGGGAACCGTT
TTGTGATTGTTAGCGGACTTGCTCGAGGTATCGACACTAGTGCTCATTTAGCCTGCCTTAAAAATGGGGGACAAACCATC
GCTATTATTGGAACAGGGTTGGATCGCTTTTACCCTAAAGAAAATAGGAAGTTGCAAACTTTCTTAGGGAAAAATCATCT
TGTGATAACAGAATACGGTCCAGGAGAAGAAGCTTTATCTTATCACTTTCCAGAACGGAATCGTATTATCGCAGGCCTTA
GCCGAGGTATTCTTGTCGTTGAAGCAAAAAATCGTTCAGGTTCCTTGATTACTTGTCAAATTGGGATAGAAGAAGGCCGA
GACATTTTTGCTGTCCCAGGAAACATTTTGGACGGGAAATCCGAAGGTTGCCTTCAGTTAATTAAAGAGGGAGCAACATG
CGTCACGTCGGGCATGGATATCCTTTCAGAGTACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Streptococcus mutans UA159

66.906

100

0.669

  dprA/cilB/dalA Streptococcus mitis SK321

60.072

100

0.601

  dprA/cilB/dalA Streptococcus pneumoniae Rx1

60.072

100

0.601

  dprA/cilB/dalA Streptococcus pneumoniae D39

60.072

100

0.601

  dprA/cilB/dalA Streptococcus pneumoniae R6

60.072

100

0.601

  dprA/cilB/dalA Streptococcus pneumoniae TIGR4

60.072

100

0.601

  dprA/cilB/dalA Streptococcus mitis NCTC 12261

59.712

100

0.597

  dprA Lactococcus lactis subsp. cremoris KW2

57.554

100

0.576

  dprA Legionella pneumophila strain ERS1305867

42.857

85.612

0.367

  dprA Acinetobacter baumannii strain A118

38.202

96.043

0.367

  dprA Acinetobacter baumannii D1279779

37.828

96.043

0.363


Multiple sequence alignment