Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   CFA72_RS04000 Genome accession   NZ_CP022206
Coordinates   728993..729175 (+) Length   60 a.a.
NCBI ID   WP_032461122.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain GURSA1     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 723993..734175
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CFA72_RS03970 (CFA72_03970) - 725133..725657 (+) 525 WP_011017840.1 Panacea domain-containing protein -
  CFA72_RS03975 (CFA72_03975) - 725645..726511 (+) 867 WP_011054729.1 DUF334 domain-containing protein -
  CFA72_RS03980 (CFA72_03980) spek 726816..727595 (+) 780 WP_011054728.1 streptococcal pyrogenic exotoxin SpeK -
  CFA72_RS03990 (CFA72_03990) - 728071..728646 (+) 576 WP_011054727.1 hypothetical protein -
  CFA72_RS04000 (CFA72_04000) prx 728993..729175 (+) 183 WP_032461122.1 Paratox Regulator
  CFA72_RS04005 (CFA72_04005) - 729706..731568 (+) 1863 WP_002994378.1 heavy metal translocating P-type ATPase -
  CFA72_RS04010 (CFA72_04010) - 731868..732803 (-) 936 WP_023610138.1 dihydroorotate oxidase -
  CFA72_RS04015 (CFA72_04015) - 733042..733737 (+) 696 WP_002983928.1 phosphoglycerate mutase -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6977.86 Da        Isoelectric Point: 4.0338

>NTDB_id=199737 CFA72_RS04000 WP_032461122.1 728993..729175(+) (prx) [Streptococcus pyogenes strain GURSA1]
MLTYDEFKQAIDNGYIAGDTVAIVRKDGQIFDYVLPNEKIRDWEVVTDEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=199737 CFA72_RS04000 WP_032461122.1 728993..729175(+) (prx) [Streptococcus pyogenes strain GURSA1]
ATGCTAACATACGACGAGTTTAAGCAAGCGATTGACAATGGATATATCGCAGGCGATACAGTAGCGATCGTGCGTAAAGA
CGGACAGATTTTTGATTATGTGTTGCCGAATGAGAAGATAAGAGATTGGGAGGTTGTGACAGACGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

90

100

0.9
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS315

78.333

100

0.783
  prx Streptococcus pyogenes MGAS315

71.667

100

0.717
  prx Streptococcus pyogenes MGAS315

90.244

68.333

0.617
  prx Streptococcus pyogenes MGAS315

80.952

70

0.567
  prx Streptococcus pyogenes MGAS315

78.571

70

0.55

Multiple sequence alignment