Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | A7U47_RS11325 | Genome accession | NZ_CP016858 |
| Coordinates | 2137007..2137477 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934753.1 | Uniprot ID | A0A1S5YP95 |
| Organism | Staphylococcus aureus strain 1971.C01 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2122178..2167177 | 2137007..2137477 | within | 0 |
Gene organization within MGE regions
Location: 2122178..2167177
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7U47_RS11210 (A7U47_04765) | lukH | 2122178..2123233 (+) | 1056 | WP_000791407.1 | bi-component leukocidin LukGH subunit H | - |
| A7U47_RS11215 (A7U47_0766) | lukG | 2123255..2124271 (+) | 1017 | WP_000595324.1 | bi-component leukocidin LukGH subunit G | - |
| A7U47_RS11220 (A7U47_0767) | sph | 2124509..2125333 (-) | 825 | Protein_2061 | sphingomyelin phosphodiesterase | - |
| A7U47_RS11225 (A7U47_0768) | - | 2125390..2126427 (-) | 1038 | WP_000857199.1 | tyrosine-type recombinase/integrase | - |
| A7U47_RS11230 (A7U47_0769) | - | 2126618..2127331 (-) | 714 | WP_001549185.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| A7U47_RS11235 (A7U47_0770) | - | 2127409..2127591 (-) | 183 | WP_000705246.1 | hypothetical protein | - |
| A7U47_RS11240 (A7U47_0771) | - | 2127795..2128136 (-) | 342 | WP_000591749.1 | hypothetical protein | - |
| A7U47_RS11245 (A7U47_0772) | - | 2128142..2129074 (-) | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| A7U47_RS11250 (A7U47_0773) | - | 2129090..2129803 (-) | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| A7U47_RS11255 (A7U47_04770) | - | 2129766..2129939 (+) | 174 | WP_001801500.1 | hypothetical protein | - |
| A7U47_RS11260 (A7U47_0774) | - | 2129936..2130199 (+) | 264 | WP_000854072.1 | helix-turn-helix transcriptional regulator | - |
| A7U47_RS11265 (A7U47_04775) | - | 2130215..2130430 (+) | 216 | WP_001025404.1 | Thoeris anti-defense Tad2 family protein | - |
| A7U47_RS11270 (A7U47_0775) | - | 2130419..2130748 (-) | 330 | WP_000180411.1 | hypothetical protein | - |
| A7U47_RS11275 (A7U47_0776) | - | 2130799..2131551 (+) | 753 | WP_001148642.1 | phage antirepressor KilAC domain-containing protein | - |
| A7U47_RS15595 | - | 2131567..2131743 (+) | 177 | WP_001001356.1 | hypothetical protein | - |
| A7U47_RS11280 (A7U47_0778) | - | 2131740..2131970 (-) | 231 | WP_000549548.1 | hypothetical protein | - |
| A7U47_RS11285 (A7U47_0779) | - | 2132029..2132349 (+) | 321 | WP_001120199.1 | DUF771 domain-containing protein | - |
| A7U47_RS11290 (A7U47_04780) | - | 2132346..2132507 (+) | 162 | WP_001285960.1 | DUF1270 domain-containing protein | - |
| A7U47_RS11295 (A7U47_0780) | - | 2132602..2132862 (+) | 261 | WP_001549178.1 | DUF2482 family protein | - |
| A7U47_RS11300 (A7U47_0781) | - | 2132902..2133162 (+) | 261 | WP_000291513.1 | DUF1108 family protein | - |
| A7U47_RS11305 (A7U47_04785) | - | 2133171..2133434 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| A7U47_RS11310 (A7U47_0782) | - | 2133443..2135386 (+) | 1944 | WP_000700561.1 | AAA family ATPase | - |
| A7U47_RS11315 (A7U47_0783) | - | 2135388..2136308 (+) | 921 | WP_000138475.1 | recombinase RecT | - |
| A7U47_RS11320 (A7U47_0784) | - | 2136389..2137006 (+) | 618 | WP_071665632.1 | MBL fold metallo-hydrolase | - |
| A7U47_RS11325 (A7U47_0785) | ssbA | 2137007..2137477 (+) | 471 | WP_000934753.1 | single-stranded DNA-binding protein | Machinery gene |
| A7U47_RS11330 (A7U47_0786) | - | 2137507..2138400 (+) | 894 | WP_000148333.1 | DnaD domain protein | - |
| A7U47_RS11335 (A7U47_0787) | - | 2138407..2138625 (+) | 219 | WP_000338530.1 | hypothetical protein | - |
| A7U47_RS11340 (A7U47_0788) | - | 2138634..2139038 (+) | 405 | WP_000401977.1 | RusA family crossover junction endodeoxyribonuclease | - |
| A7U47_RS11345 (A7U47_0789) | - | 2139051..2139419 (+) | 369 | WP_000101288.1 | SA1788 family PVL leukocidin-associated protein | - |
| A7U47_RS11350 (A7U47_0790) | - | 2139423..2139665 (+) | 243 | WP_000131383.1 | phi PVL orf 51-like protein | - |
| A7U47_RS11355 (A7U47_0791) | - | 2139674..2140045 (+) | 372 | WP_001549172.1 | hypothetical protein | - |
| A7U47_RS11360 (A7U47_0792) | - | 2140038..2140274 (+) | 237 | WP_001065101.1 | DUF1024 family protein | - |
| A7U47_RS11365 (A7U47_0793) | - | 2140264..2140506 (+) | 243 | WP_000700108.1 | hypothetical protein | - |
| A7U47_RS11370 (A7U47_0794) | - | 2140499..2141032 (+) | 534 | WP_000181819.1 | dUTP diphosphatase | - |
| A7U47_RS11375 (A7U47_0795) | - | 2141069..2141314 (+) | 246 | WP_001282074.1 | hypothetical protein | - |
| A7U47_RS11380 (A7U47_0796) | - | 2141311..2141517 (+) | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| A7U47_RS11385 (A7U47_0797) | - | 2141514..2141900 (+) | 387 | WP_000592207.1 | hypothetical protein | - |
| A7U47_RS11390 (A7U47_0798) | rinB | 2141897..2142046 (+) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| A7U47_RS11395 (A7U47_0799) | - | 2142046..2142246 (+) | 201 | WP_000265043.1 | DUF1514 family protein | - |
| A7U47_RS11400 (A7U47_0800) | - | 2142274..2142690 (+) | 417 | WP_000590122.1 | hypothetical protein | - |
| A7U47_RS11405 (A7U47_0801) | - | 2142922..2143221 (+) | 300 | WP_000988336.1 | HNH endonuclease | - |
| A7U47_RS11410 (A7U47_0802) | - | 2143351..2143695 (+) | 345 | WP_000402904.1 | hypothetical protein | - |
| A7U47_RS11415 (A7U47_0803) | - | 2143692..2145353 (+) | 1662 | WP_000625088.1 | terminase large subunit | - |
| A7U47_RS11420 (A7U47_0804) | - | 2145369..2146556 (+) | 1188 | WP_000025274.1 | phage portal protein | - |
| A7U47_RS11425 (A7U47_0805) | - | 2146540..2147277 (+) | 738 | WP_000642728.1 | head maturation protease, ClpP-related | - |
| A7U47_RS11430 (A7U47_0806) | - | 2147301..2148446 (+) | 1146 | WP_000154559.1 | phage major capsid protein | - |
| A7U47_RS11435 (A7U47_0807) | - | 2148466..2148750 (+) | 285 | WP_000238236.1 | hypothetical protein | - |
| A7U47_RS11440 (A7U47_0808) | - | 2148740..2149024 (+) | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| A7U47_RS11445 (A7U47_0809) | - | 2149008..2149370 (+) | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| A7U47_RS11450 (A7U47_0810) | - | 2149367..2149771 (+) | 405 | WP_000114229.1 | HK97 gp10 family phage protein | - |
| A7U47_RS11455 (A7U47_04790) | - | 2149768..2150172 (+) | 405 | WP_000565500.1 | hypothetical protein | - |
| A7U47_RS11460 (A7U47_0811) | - | 2150176..2150820 (+) | 645 | WP_000260578.1 | major tail protein | - |
| A7U47_RS11465 (A7U47_04795) | - | 2150847..2151086 (+) | 240 | WP_094969769.1 | Ig-like domain-containing protein | - |
| A7U47_RS11470 (A7U47_0813) | gpG | 2151136..2151486 (+) | 351 | WP_001096354.1 | phage tail assembly chaperone G | - |
| A7U47_RS15705 | gpGT | 2151537..2151674 (+) | 138 | WP_001549167.1 | phage tail assembly chaperone GT | - |
| A7U47_RS11475 (A7U47_0815) | - | 2151731..2156260 (+) | 4530 | WP_001551779.1 | phage tail tape measure protein | - |
| A7U47_RS11480 (A7U47_0816) | - | 2156257..2157741 (+) | 1485 | WP_000567394.1 | phage distal tail protein | - |
| A7U47_RS11485 (A7U47_0818) | - | 2157757..2161542 (+) | 3786 | WP_000582165.1 | phage tail spike protein | - |
| A7U47_RS11490 (A7U47_0819) | - | 2161532..2161684 (+) | 153 | WP_001153681.1 | hypothetical protein | - |
| A7U47_RS11495 (A7U47_0820) | - | 2161731..2162018 (+) | 288 | WP_001040261.1 | hypothetical protein | - |
| A7U47_RS11500 (A7U47_0821) | - | 2162076..2162372 (+) | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| A7U47_RS11505 (A7U47_0822) | pepG1 | 2162564..2162698 (+) | 135 | WP_000226108.1 | type I toxin-antitoxin system toxin PepG1 | - |
| A7U47_RS11510 (A7U47_04800) | - | 2162751..2162858 (-) | 108 | WP_001791821.1 | hypothetical protein | - |
| A7U47_RS11515 (A7U47_0823) | - | 2162910..2163164 (+) | 255 | WP_000611512.1 | phage holin | - |
| A7U47_RS11520 (A7U47_0824) | - | 2163176..2163931 (+) | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| A7U47_RS11525 (A7U47_0825) | sak | 2164122..2164613 (+) | 492 | WP_000919350.1 | staphylokinase | - |
| A7U47_RS11535 (A7U47_04810) | - | 2165260..2165598 (+) | 339 | Protein_2125 | SH3 domain-containing protein | - |
| A7U47_RS11540 (A7U47_0827) | - | 2165693..2166142 (-) | 450 | WP_000727649.1 | chemotaxis-inhibiting protein CHIPS | - |
| A7U47_RS11545 (A7U47_0828) | scn | 2166827..2167177 (+) | 351 | WP_000702263.1 | complement inhibitor SCIN-A | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17668.55 Da Isoelectric Point: 5.2672
>NTDB_id=192922 A7U47_RS11325 WP_000934753.1 2137007..2137477(+) (ssbA) [Staphylococcus aureus strain 1971.C01]
MLNRTILVGRLTRDPELRTTQNGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
MLNRTILVGRLTRDPELRTTQNGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=192922 A7U47_RS11325 WP_000934753.1 2137007..2137477(+) (ssbA) [Staphylococcus aureus strain 1971.C01]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAATGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAATGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56.497 |
100 |
0.641 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50 |
100 |
0.545 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
33.333 |
100 |
0.378 |
| ssb | Neisseria meningitidis MC58 |
33.526 |
100 |
0.372 |
| ssb | Neisseria gonorrhoeae MS11 |
33.526 |
100 |
0.372 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
47.5 |
76.923 |
0.365 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
47.5 |
76.923 |
0.365 |